Cargando…

Unsupervised Detection of High-Frequency Oscillations Using Time-Frequency Maps and Computer Vision

High-frequency oscillations >80 Hz (HFOs) have unique features distinguishing them from spikes and artifactual components that can be well-evidenced in the time-frequency representations. We introduce an unsupervised HFO detector that uses computer-vision algorithms to detect HFO landmarks on two...

Descripción completa

Detalles Bibliográficos
Autores principales: Donos, Cristian, Mîndruţă, Ioana, Barborica, Andrei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7104802/
https://www.ncbi.nlm.nih.gov/pubmed/32265622
http://dx.doi.org/10.3389/fnins.2020.00183
_version_ 1783512297693511680
author Donos, Cristian
Mîndruţă, Ioana
Barborica, Andrei
author_facet Donos, Cristian
Mîndruţă, Ioana
Barborica, Andrei
author_sort Donos, Cristian
collection PubMed
description High-frequency oscillations >80 Hz (HFOs) have unique features distinguishing them from spikes and artifactual components that can be well-evidenced in the time-frequency representations. We introduce an unsupervised HFO detector that uses computer-vision algorithms to detect HFO landmarks on two-dimensional (2D) time-frequency maps. To validate the detector, we introduce an analytical model of the HFO based on a sinewave having a Gaussian envelope, for which analytical equations in time-frequency space can be derived, allowing us to establish a direct correspondence between common HFO detection criteria in the time domain with the ones in the frequency domain, used by the computer-vision detection algorithm. The detector identifies potential HFO events on the time-frequency representation, which are classified as true HFOs if criteria regarding the HFO's frequency, amplitude, and duration are met. The detector is validated on simulated HFOs according to the analytical model, in the presence of noise, with different signal-to-noise ratios (SNRs) ranging from −9 to 0 dB. The detector's sensitivity was 0.64 at an SNR of −9 dB, 0.98 at −6 dB, and >0.99 at −3 dB and 0 dB, while its positive prediction value was >0.95, regardless of the SNR. Using the same simulation dataset, our detector is benchmarked against four previously published HFO detectors. The F-measure, a combined metric that takes into account both sensitivity and positive prediction value, was used to compare detection algorithms. Our detector surpassed the other detectors at −6, −3, and 0 dB and had the second best F-score at −9 dB SNR after the MNI detector (0.77 vs. 0.83). The ability to detect HFOs in clinical recordings has been tested on a set of 36 intracranial electroencephalogram (EEG) channels in six patients, with 89% of the detections being validated by two independent reviewers. The results demonstrate that the unsupervised detection of HFOs based on their 2D features in time-frequency maps is feasible and has a performance comparable or better than the most used HFO detectors.
format Online
Article
Text
id pubmed-7104802
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-71048022020-04-07 Unsupervised Detection of High-Frequency Oscillations Using Time-Frequency Maps and Computer Vision Donos, Cristian Mîndruţă, Ioana Barborica, Andrei Front Neurosci Neuroscience High-frequency oscillations >80 Hz (HFOs) have unique features distinguishing them from spikes and artifactual components that can be well-evidenced in the time-frequency representations. We introduce an unsupervised HFO detector that uses computer-vision algorithms to detect HFO landmarks on two-dimensional (2D) time-frequency maps. To validate the detector, we introduce an analytical model of the HFO based on a sinewave having a Gaussian envelope, for which analytical equations in time-frequency space can be derived, allowing us to establish a direct correspondence between common HFO detection criteria in the time domain with the ones in the frequency domain, used by the computer-vision detection algorithm. The detector identifies potential HFO events on the time-frequency representation, which are classified as true HFOs if criteria regarding the HFO's frequency, amplitude, and duration are met. The detector is validated on simulated HFOs according to the analytical model, in the presence of noise, with different signal-to-noise ratios (SNRs) ranging from −9 to 0 dB. The detector's sensitivity was 0.64 at an SNR of −9 dB, 0.98 at −6 dB, and >0.99 at −3 dB and 0 dB, while its positive prediction value was >0.95, regardless of the SNR. Using the same simulation dataset, our detector is benchmarked against four previously published HFO detectors. The F-measure, a combined metric that takes into account both sensitivity and positive prediction value, was used to compare detection algorithms. Our detector surpassed the other detectors at −6, −3, and 0 dB and had the second best F-score at −9 dB SNR after the MNI detector (0.77 vs. 0.83). The ability to detect HFOs in clinical recordings has been tested on a set of 36 intracranial electroencephalogram (EEG) channels in six patients, with 89% of the detections being validated by two independent reviewers. The results demonstrate that the unsupervised detection of HFOs based on their 2D features in time-frequency maps is feasible and has a performance comparable or better than the most used HFO detectors. Frontiers Media S.A. 2020-03-23 /pmc/articles/PMC7104802/ /pubmed/32265622 http://dx.doi.org/10.3389/fnins.2020.00183 Text en Copyright © 2020 Donos, Mîndruţă and Barborica. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Donos, Cristian
Mîndruţă, Ioana
Barborica, Andrei
Unsupervised Detection of High-Frequency Oscillations Using Time-Frequency Maps and Computer Vision
title Unsupervised Detection of High-Frequency Oscillations Using Time-Frequency Maps and Computer Vision
title_full Unsupervised Detection of High-Frequency Oscillations Using Time-Frequency Maps and Computer Vision
title_fullStr Unsupervised Detection of High-Frequency Oscillations Using Time-Frequency Maps and Computer Vision
title_full_unstemmed Unsupervised Detection of High-Frequency Oscillations Using Time-Frequency Maps and Computer Vision
title_short Unsupervised Detection of High-Frequency Oscillations Using Time-Frequency Maps and Computer Vision
title_sort unsupervised detection of high-frequency oscillations using time-frequency maps and computer vision
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7104802/
https://www.ncbi.nlm.nih.gov/pubmed/32265622
http://dx.doi.org/10.3389/fnins.2020.00183
work_keys_str_mv AT donoscristian unsuperviseddetectionofhighfrequencyoscillationsusingtimefrequencymapsandcomputervision
AT mindrutaioana unsuperviseddetectionofhighfrequencyoscillationsusingtimefrequencymapsandcomputervision
AT barboricaandrei unsuperviseddetectionofhighfrequencyoscillationsusingtimefrequencymapsandcomputervision