Cargando…

CLEC3B as a potential diagnostic and prognostic biomarker in lung cancer and association with the immune microenvironment

BACKGROUND: Lung cancer is the leading cause of cancer-related mortality globally. Discovering effective biomarkers for early diagnosis and prognosis is important to reduce the mortality rate and ensure efficient therapy for lung cancer patients. C-type lectin domain family 3 member B (CLEC3B) has b...

Descripción completa

Detalles Bibliográficos
Autores principales: Sun, Jiaxing, Xie, Tian, Jamal, Muhammad, Tu, Zhenbo, Li, Xinran, Wu, Yingjie, Li, Jingyuan, Zhang, Qiuping, Huang, Xiaoxing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7110733/
https://www.ncbi.nlm.nih.gov/pubmed/32265595
http://dx.doi.org/10.1186/s12935-020-01183-1
_version_ 1783513119341936640
author Sun, Jiaxing
Xie, Tian
Jamal, Muhammad
Tu, Zhenbo
Li, Xinran
Wu, Yingjie
Li, Jingyuan
Zhang, Qiuping
Huang, Xiaoxing
author_facet Sun, Jiaxing
Xie, Tian
Jamal, Muhammad
Tu, Zhenbo
Li, Xinran
Wu, Yingjie
Li, Jingyuan
Zhang, Qiuping
Huang, Xiaoxing
author_sort Sun, Jiaxing
collection PubMed
description BACKGROUND: Lung cancer is the leading cause of cancer-related mortality globally. Discovering effective biomarkers for early diagnosis and prognosis is important to reduce the mortality rate and ensure efficient therapy for lung cancer patients. C-type lectin domain family 3 member B (CLEC3B) has been reported in various cancers, but its correlation with lung cancer remains elusive. METHODS: The GEO, TCGA and Oncomine databases were analyzed to examine the expression of CLEC3B in lung cancer. The CLEC3B mRNA levels in 15 patient tissue samples were detected by real-time PCR and the CLEC3B protein levels in 34 patient tissue samples were detected by immunohistochemistry. A Chi-square test was performed to analyze the correlation of CLEC3B expression and clinicopathological factors. The diagnostic value of CLEC3B was revealed by receiver operating characteristic (ROC) curves. Univariate and multivariate Cox proportional hazards regression models and Kaplan–Meier plots were used to evaluate the prognostic value of CLEC3B in lung cancer. The TIMER database was used to evaluate the correlation of CLEC3B and immune infiltration. Gene set enrichment analysis revealed tumor‐associated biological processes related to CLEC3B. RESULTS: CLEC3B is significantly downregulated in lung cancer patients compared with nontumor controls according to database analysis and patient tissue sample detection (p < 0.001). Specifically, CLEC3B is significantly downregulated in stage IA lung cancer patients (p < 0.001) and has a high diagnostic accuracy (area under the receiver operating characteristic curve > 0.9). Moreover, low expression of CLEC3B is related to poor progression-free survival (HR = 0.60, 95% CI 0.49–0.74, p = 8.3e−07) and overall survival (HR = 0.66, 95% CI 0.58–0.75, p = 2.1e−10), indicating it as a risk factor for lung cancer. Multivariate analysis value showed that low expression of CLEC3B may be an independent risk factor for disease‐free survival in lung cancer patients (HR = 0.655, 95% CI 0.430–0.996, Cox p = 0.048). In addition, we also investigated the potential role of CLEC3B in tumor-immune interactions and found that CLEC3B might be associated with the immune infiltration and immune activation of lung cancer, especially in squamous cell carcinoma. CONCLUSIONS: Our findings indicate that CLEC3B expression is downregulated in lung cancer and reveal the diagnostic and prognostic potential of CLEC3B in lung cancer and its potential as an immune-related therapeutic target in lung cancer.
format Online
Article
Text
id pubmed-7110733
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-71107332020-04-07 CLEC3B as a potential diagnostic and prognostic biomarker in lung cancer and association with the immune microenvironment Sun, Jiaxing Xie, Tian Jamal, Muhammad Tu, Zhenbo Li, Xinran Wu, Yingjie Li, Jingyuan Zhang, Qiuping Huang, Xiaoxing Cancer Cell Int Primary Research BACKGROUND: Lung cancer is the leading cause of cancer-related mortality globally. Discovering effective biomarkers for early diagnosis and prognosis is important to reduce the mortality rate and ensure efficient therapy for lung cancer patients. C-type lectin domain family 3 member B (CLEC3B) has been reported in various cancers, but its correlation with lung cancer remains elusive. METHODS: The GEO, TCGA and Oncomine databases were analyzed to examine the expression of CLEC3B in lung cancer. The CLEC3B mRNA levels in 15 patient tissue samples were detected by real-time PCR and the CLEC3B protein levels in 34 patient tissue samples were detected by immunohistochemistry. A Chi-square test was performed to analyze the correlation of CLEC3B expression and clinicopathological factors. The diagnostic value of CLEC3B was revealed by receiver operating characteristic (ROC) curves. Univariate and multivariate Cox proportional hazards regression models and Kaplan–Meier plots were used to evaluate the prognostic value of CLEC3B in lung cancer. The TIMER database was used to evaluate the correlation of CLEC3B and immune infiltration. Gene set enrichment analysis revealed tumor‐associated biological processes related to CLEC3B. RESULTS: CLEC3B is significantly downregulated in lung cancer patients compared with nontumor controls according to database analysis and patient tissue sample detection (p < 0.001). Specifically, CLEC3B is significantly downregulated in stage IA lung cancer patients (p < 0.001) and has a high diagnostic accuracy (area under the receiver operating characteristic curve > 0.9). Moreover, low expression of CLEC3B is related to poor progression-free survival (HR = 0.60, 95% CI 0.49–0.74, p = 8.3e−07) and overall survival (HR = 0.66, 95% CI 0.58–0.75, p = 2.1e−10), indicating it as a risk factor for lung cancer. Multivariate analysis value showed that low expression of CLEC3B may be an independent risk factor for disease‐free survival in lung cancer patients (HR = 0.655, 95% CI 0.430–0.996, Cox p = 0.048). In addition, we also investigated the potential role of CLEC3B in tumor-immune interactions and found that CLEC3B might be associated with the immune infiltration and immune activation of lung cancer, especially in squamous cell carcinoma. CONCLUSIONS: Our findings indicate that CLEC3B expression is downregulated in lung cancer and reveal the diagnostic and prognostic potential of CLEC3B in lung cancer and its potential as an immune-related therapeutic target in lung cancer. BioMed Central 2020-04-01 /pmc/articles/PMC7110733/ /pubmed/32265595 http://dx.doi.org/10.1186/s12935-020-01183-1 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Primary Research
Sun, Jiaxing
Xie, Tian
Jamal, Muhammad
Tu, Zhenbo
Li, Xinran
Wu, Yingjie
Li, Jingyuan
Zhang, Qiuping
Huang, Xiaoxing
CLEC3B as a potential diagnostic and prognostic biomarker in lung cancer and association with the immune microenvironment
title CLEC3B as a potential diagnostic and prognostic biomarker in lung cancer and association with the immune microenvironment
title_full CLEC3B as a potential diagnostic and prognostic biomarker in lung cancer and association with the immune microenvironment
title_fullStr CLEC3B as a potential diagnostic and prognostic biomarker in lung cancer and association with the immune microenvironment
title_full_unstemmed CLEC3B as a potential diagnostic and prognostic biomarker in lung cancer and association with the immune microenvironment
title_short CLEC3B as a potential diagnostic and prognostic biomarker in lung cancer and association with the immune microenvironment
title_sort clec3b as a potential diagnostic and prognostic biomarker in lung cancer and association with the immune microenvironment
topic Primary Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7110733/
https://www.ncbi.nlm.nih.gov/pubmed/32265595
http://dx.doi.org/10.1186/s12935-020-01183-1
work_keys_str_mv AT sunjiaxing clec3basapotentialdiagnosticandprognosticbiomarkerinlungcancerandassociationwiththeimmunemicroenvironment
AT xietian clec3basapotentialdiagnosticandprognosticbiomarkerinlungcancerandassociationwiththeimmunemicroenvironment
AT jamalmuhammad clec3basapotentialdiagnosticandprognosticbiomarkerinlungcancerandassociationwiththeimmunemicroenvironment
AT tuzhenbo clec3basapotentialdiagnosticandprognosticbiomarkerinlungcancerandassociationwiththeimmunemicroenvironment
AT lixinran clec3basapotentialdiagnosticandprognosticbiomarkerinlungcancerandassociationwiththeimmunemicroenvironment
AT wuyingjie clec3basapotentialdiagnosticandprognosticbiomarkerinlungcancerandassociationwiththeimmunemicroenvironment
AT lijingyuan clec3basapotentialdiagnosticandprognosticbiomarkerinlungcancerandassociationwiththeimmunemicroenvironment
AT zhangqiuping clec3basapotentialdiagnosticandprognosticbiomarkerinlungcancerandassociationwiththeimmunemicroenvironment
AT huangxiaoxing clec3basapotentialdiagnosticandprognosticbiomarkerinlungcancerandassociationwiththeimmunemicroenvironment