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Identification of differentially expressed circulating exosomal lncRNAs in IgA nephropathy patients

BACKGROUND: Although immunoglobulin A nephropathy (IgAN) is one of the foremost primary glomerular disease, treatment of IgAN is still in infancy. Non-invasive biomarkers are urgently needed for IgAN diagnosis. We investigate the difference in expression profiles of exosomal long non-coding-RNAs (ln...

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Autores principales: Guo, Na, Zhou, Qin, Huang, Xiang, Yu, Jianwen, Han, Qianqian, Nong, Baoting, Xiong, Yuanyan, Liang, Peifen, Li, Jiajia, Feng, Min, Lv, Jun, Yang, Qiongqiong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7110735/
https://www.ncbi.nlm.nih.gov/pubmed/32234013
http://dx.doi.org/10.1186/s12865-020-00344-1
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author Guo, Na
Zhou, Qin
Huang, Xiang
Yu, Jianwen
Han, Qianqian
Nong, Baoting
Xiong, Yuanyan
Liang, Peifen
Li, Jiajia
Feng, Min
Lv, Jun
Yang, Qiongqiong
author_facet Guo, Na
Zhou, Qin
Huang, Xiang
Yu, Jianwen
Han, Qianqian
Nong, Baoting
Xiong, Yuanyan
Liang, Peifen
Li, Jiajia
Feng, Min
Lv, Jun
Yang, Qiongqiong
author_sort Guo, Na
collection PubMed
description BACKGROUND: Although immunoglobulin A nephropathy (IgAN) is one of the foremost primary glomerular disease, treatment of IgAN is still in infancy. Non-invasive biomarkers are urgently needed for IgAN diagnosis. We investigate the difference in expression profiles of exosomal long non-coding-RNAs (lncRNAs) in plasma from IgAN patients compared with their healthy first-degree relatives, which may reveal novel non-invasive IgAN biomarkers. METHODS: We isolated exosomes from the plasma of both IgAN patients and their healthy first-degree relatives. High-throughput RNA sequencing and real-time quantitative polymerase chain reaction (qRT-PCR) was used to validate lncRNA expression profiles. Pathway enrichment analysis was used to predict their nearest protein-coding genes. RESULTS: lncRNA-G21551 was significantly down-regulated in IgAN patients. Interestingly, the nearest protein-coding gene of lncRNA-G21551 was found to be encoding the low affinity receptor of the Fc segment of immunoglobulin G (FCGR3B). CONCLUSIONS: Exosomal lncRNA-G21551, with FCGR3B as the nearest protein-coding gene, was down-regulated in IgAN patients, indicating its potential to serve as a non-invasive biomarker for IgAN.
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spelling pubmed-71107352020-04-07 Identification of differentially expressed circulating exosomal lncRNAs in IgA nephropathy patients Guo, Na Zhou, Qin Huang, Xiang Yu, Jianwen Han, Qianqian Nong, Baoting Xiong, Yuanyan Liang, Peifen Li, Jiajia Feng, Min Lv, Jun Yang, Qiongqiong BMC Immunol Research Article BACKGROUND: Although immunoglobulin A nephropathy (IgAN) is one of the foremost primary glomerular disease, treatment of IgAN is still in infancy. Non-invasive biomarkers are urgently needed for IgAN diagnosis. We investigate the difference in expression profiles of exosomal long non-coding-RNAs (lncRNAs) in plasma from IgAN patients compared with their healthy first-degree relatives, which may reveal novel non-invasive IgAN biomarkers. METHODS: We isolated exosomes from the plasma of both IgAN patients and their healthy first-degree relatives. High-throughput RNA sequencing and real-time quantitative polymerase chain reaction (qRT-PCR) was used to validate lncRNA expression profiles. Pathway enrichment analysis was used to predict their nearest protein-coding genes. RESULTS: lncRNA-G21551 was significantly down-regulated in IgAN patients. Interestingly, the nearest protein-coding gene of lncRNA-G21551 was found to be encoding the low affinity receptor of the Fc segment of immunoglobulin G (FCGR3B). CONCLUSIONS: Exosomal lncRNA-G21551, with FCGR3B as the nearest protein-coding gene, was down-regulated in IgAN patients, indicating its potential to serve as a non-invasive biomarker for IgAN. BioMed Central 2020-03-31 /pmc/articles/PMC7110735/ /pubmed/32234013 http://dx.doi.org/10.1186/s12865-020-00344-1 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Guo, Na
Zhou, Qin
Huang, Xiang
Yu, Jianwen
Han, Qianqian
Nong, Baoting
Xiong, Yuanyan
Liang, Peifen
Li, Jiajia
Feng, Min
Lv, Jun
Yang, Qiongqiong
Identification of differentially expressed circulating exosomal lncRNAs in IgA nephropathy patients
title Identification of differentially expressed circulating exosomal lncRNAs in IgA nephropathy patients
title_full Identification of differentially expressed circulating exosomal lncRNAs in IgA nephropathy patients
title_fullStr Identification of differentially expressed circulating exosomal lncRNAs in IgA nephropathy patients
title_full_unstemmed Identification of differentially expressed circulating exosomal lncRNAs in IgA nephropathy patients
title_short Identification of differentially expressed circulating exosomal lncRNAs in IgA nephropathy patients
title_sort identification of differentially expressed circulating exosomal lncrnas in iga nephropathy patients
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7110735/
https://www.ncbi.nlm.nih.gov/pubmed/32234013
http://dx.doi.org/10.1186/s12865-020-00344-1
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