Cargando…
Proteomic analysis by iTRAQ in red claw crayfish, Cherax quadricarinatus, hematopoietic tissue cells post white spot syndrome virus infection
To elucidate proteomic changes of Hpt cells from red claw crayfish, Cherax quadricarinatus, we have carried out isobaric tags for relative and absolute quantitation (iTRAQ) of cellular proteins at both early (1 hpi) and late stage (12 hpi) post white spot syndrome virus (WSSV) infection. Protein dat...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier Ltd.
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7111676/ https://www.ncbi.nlm.nih.gov/pubmed/26845698 http://dx.doi.org/10.1016/j.fsi.2016.01.035 |
_version_ | 1783513331387072512 |
---|---|
author | Jeswin, Joseph Xie, Xiao-lu Ji, Qiao-lin Wang, Ke-jian Liu, Hai-peng |
author_facet | Jeswin, Joseph Xie, Xiao-lu Ji, Qiao-lin Wang, Ke-jian Liu, Hai-peng |
author_sort | Jeswin, Joseph |
collection | PubMed |
description | To elucidate proteomic changes of Hpt cells from red claw crayfish, Cherax quadricarinatus, we have carried out isobaric tags for relative and absolute quantitation (iTRAQ) of cellular proteins at both early (1 hpi) and late stage (12 hpi) post white spot syndrome virus (WSSV) infection. Protein database search revealed 594 protein hits by Mascot, in which 17 and 30 proteins were present as differentially expressed proteins at early and late viral infection, respectively. Generally, these differentially expressed proteins include: 1) the metabolic process related proteins in glycolysis and glucogenesis, DNA replication, nucleotide/amino acid/fatty acid metabolism and protein biosynthesis; 2) the signal transduction related proteins like small GTPases, G-protein-alpha stimulatory subunit, proteins bearing PDZ- or 14-3-3-domains that help holding together and organize signaling complexes, casein kinase I and proteins of the MAP-kinase signal transduction pathway; 3) the immune defense related proteins such as α-2 macroglobulin, transglutaminase and trans-activation response RNA-binding protein 1. Taken together, these protein information shed new light on the host cellular response against WSSV infection in a crustacean cell culture. |
format | Online Article Text |
id | pubmed-7111676 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-71116762020-04-02 Proteomic analysis by iTRAQ in red claw crayfish, Cherax quadricarinatus, hematopoietic tissue cells post white spot syndrome virus infection Jeswin, Joseph Xie, Xiao-lu Ji, Qiao-lin Wang, Ke-jian Liu, Hai-peng Fish Shellfish Immunol Short Communication To elucidate proteomic changes of Hpt cells from red claw crayfish, Cherax quadricarinatus, we have carried out isobaric tags for relative and absolute quantitation (iTRAQ) of cellular proteins at both early (1 hpi) and late stage (12 hpi) post white spot syndrome virus (WSSV) infection. Protein database search revealed 594 protein hits by Mascot, in which 17 and 30 proteins were present as differentially expressed proteins at early and late viral infection, respectively. Generally, these differentially expressed proteins include: 1) the metabolic process related proteins in glycolysis and glucogenesis, DNA replication, nucleotide/amino acid/fatty acid metabolism and protein biosynthesis; 2) the signal transduction related proteins like small GTPases, G-protein-alpha stimulatory subunit, proteins bearing PDZ- or 14-3-3-domains that help holding together and organize signaling complexes, casein kinase I and proteins of the MAP-kinase signal transduction pathway; 3) the immune defense related proteins such as α-2 macroglobulin, transglutaminase and trans-activation response RNA-binding protein 1. Taken together, these protein information shed new light on the host cellular response against WSSV infection in a crustacean cell culture. Elsevier Ltd. 2016-03 2016-02-01 /pmc/articles/PMC7111676/ /pubmed/26845698 http://dx.doi.org/10.1016/j.fsi.2016.01.035 Text en Copyright © 2016 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Short Communication Jeswin, Joseph Xie, Xiao-lu Ji, Qiao-lin Wang, Ke-jian Liu, Hai-peng Proteomic analysis by iTRAQ in red claw crayfish, Cherax quadricarinatus, hematopoietic tissue cells post white spot syndrome virus infection |
title | Proteomic analysis by iTRAQ in red claw crayfish, Cherax quadricarinatus, hematopoietic tissue cells post white spot syndrome virus infection |
title_full | Proteomic analysis by iTRAQ in red claw crayfish, Cherax quadricarinatus, hematopoietic tissue cells post white spot syndrome virus infection |
title_fullStr | Proteomic analysis by iTRAQ in red claw crayfish, Cherax quadricarinatus, hematopoietic tissue cells post white spot syndrome virus infection |
title_full_unstemmed | Proteomic analysis by iTRAQ in red claw crayfish, Cherax quadricarinatus, hematopoietic tissue cells post white spot syndrome virus infection |
title_short | Proteomic analysis by iTRAQ in red claw crayfish, Cherax quadricarinatus, hematopoietic tissue cells post white spot syndrome virus infection |
title_sort | proteomic analysis by itraq in red claw crayfish, cherax quadricarinatus, hematopoietic tissue cells post white spot syndrome virus infection |
topic | Short Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7111676/ https://www.ncbi.nlm.nih.gov/pubmed/26845698 http://dx.doi.org/10.1016/j.fsi.2016.01.035 |
work_keys_str_mv | AT jeswinjoseph proteomicanalysisbyitraqinredclawcrayfishcheraxquadricarinatushematopoietictissuecellspostwhitespotsyndromevirusinfection AT xiexiaolu proteomicanalysisbyitraqinredclawcrayfishcheraxquadricarinatushematopoietictissuecellspostwhitespotsyndromevirusinfection AT jiqiaolin proteomicanalysisbyitraqinredclawcrayfishcheraxquadricarinatushematopoietictissuecellspostwhitespotsyndromevirusinfection AT wangkejian proteomicanalysisbyitraqinredclawcrayfishcheraxquadricarinatushematopoietictissuecellspostwhitespotsyndromevirusinfection AT liuhaipeng proteomicanalysisbyitraqinredclawcrayfishcheraxquadricarinatushematopoietictissuecellspostwhitespotsyndromevirusinfection |