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Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica

Adenoviruses have been identified in humans and a wide range of vertebrate animals, but not previously from the polar region. Here, we report the entire 26,340-bp genome of a novel adenovirus, detected by PCR, in tissues of six of nine South Polar skuas (Catharacta maccormicki), collected in Lake Ki...

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Autores principales: Park, Yon Mi, Kim, Jeong-Hoon, Gu, Se Hun, Lee, Sook Young, Lee, Min-Goo, Kang, Yoon Kyoo, Kang, Sung-Ho, Kim, Hak Jun, Song, Jin-Won
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Inc. 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7111983/
https://www.ncbi.nlm.nih.gov/pubmed/22078165
http://dx.doi.org/10.1016/j.virol.2011.10.008
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author Park, Yon Mi
Kim, Jeong-Hoon
Gu, Se Hun
Lee, Sook Young
Lee, Min-Goo
Kang, Yoon Kyoo
Kang, Sung-Ho
Kim, Hak Jun
Song, Jin-Won
author_facet Park, Yon Mi
Kim, Jeong-Hoon
Gu, Se Hun
Lee, Sook Young
Lee, Min-Goo
Kang, Yoon Kyoo
Kang, Sung-Ho
Kim, Hak Jun
Song, Jin-Won
author_sort Park, Yon Mi
collection PubMed
description Adenoviruses have been identified in humans and a wide range of vertebrate animals, but not previously from the polar region. Here, we report the entire 26,340-bp genome of a novel adenovirus, detected by PCR, in tissues of six of nine South Polar skuas (Catharacta maccormicki), collected in Lake King Sejong, King George Island, Antarctica, from 2007 to 2009. The DNA polymerase, penton base, hexon and fiber genes of the South Polar skua adenovirus (SPSAdV) exhibited 68.3%, 75.4%, 74.9% and 48.0% nucleotide sequence similarity with their counterparts in turkey hemorrhagic enteritis virus. Phylogenetic analysis based on the entire genome revealed that SPSAdV belonged to the genus Siadenovirus, family Adenoviridae. This is the first evidence of a novel adenovirus, SPSAdV, from a large polar seabird (family Stercorariidae) in Antarctica.
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spelling pubmed-71119832020-04-02 Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica Park, Yon Mi Kim, Jeong-Hoon Gu, Se Hun Lee, Sook Young Lee, Min-Goo Kang, Yoon Kyoo Kang, Sung-Ho Kim, Hak Jun Song, Jin-Won Virology Article Adenoviruses have been identified in humans and a wide range of vertebrate animals, but not previously from the polar region. Here, we report the entire 26,340-bp genome of a novel adenovirus, detected by PCR, in tissues of six of nine South Polar skuas (Catharacta maccormicki), collected in Lake King Sejong, King George Island, Antarctica, from 2007 to 2009. The DNA polymerase, penton base, hexon and fiber genes of the South Polar skua adenovirus (SPSAdV) exhibited 68.3%, 75.4%, 74.9% and 48.0% nucleotide sequence similarity with their counterparts in turkey hemorrhagic enteritis virus. Phylogenetic analysis based on the entire genome revealed that SPSAdV belonged to the genus Siadenovirus, family Adenoviridae. This is the first evidence of a novel adenovirus, SPSAdV, from a large polar seabird (family Stercorariidae) in Antarctica. Elsevier Inc. 2012-01-05 2011-11-10 /pmc/articles/PMC7111983/ /pubmed/22078165 http://dx.doi.org/10.1016/j.virol.2011.10.008 Text en Copyright © 2011 Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Park, Yon Mi
Kim, Jeong-Hoon
Gu, Se Hun
Lee, Sook Young
Lee, Min-Goo
Kang, Yoon Kyoo
Kang, Sung-Ho
Kim, Hak Jun
Song, Jin-Won
Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica
title Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica
title_full Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica
title_fullStr Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica
title_full_unstemmed Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica
title_short Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica
title_sort full genome analysis of a novel adenovirus from the south polar skua (catharacta maccormicki) in antarctica
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7111983/
https://www.ncbi.nlm.nih.gov/pubmed/22078165
http://dx.doi.org/10.1016/j.virol.2011.10.008
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