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Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica
Adenoviruses have been identified in humans and a wide range of vertebrate animals, but not previously from the polar region. Here, we report the entire 26,340-bp genome of a novel adenovirus, detected by PCR, in tissues of six of nine South Polar skuas (Catharacta maccormicki), collected in Lake Ki...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier Inc.
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7111983/ https://www.ncbi.nlm.nih.gov/pubmed/22078165 http://dx.doi.org/10.1016/j.virol.2011.10.008 |
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author | Park, Yon Mi Kim, Jeong-Hoon Gu, Se Hun Lee, Sook Young Lee, Min-Goo Kang, Yoon Kyoo Kang, Sung-Ho Kim, Hak Jun Song, Jin-Won |
author_facet | Park, Yon Mi Kim, Jeong-Hoon Gu, Se Hun Lee, Sook Young Lee, Min-Goo Kang, Yoon Kyoo Kang, Sung-Ho Kim, Hak Jun Song, Jin-Won |
author_sort | Park, Yon Mi |
collection | PubMed |
description | Adenoviruses have been identified in humans and a wide range of vertebrate animals, but not previously from the polar region. Here, we report the entire 26,340-bp genome of a novel adenovirus, detected by PCR, in tissues of six of nine South Polar skuas (Catharacta maccormicki), collected in Lake King Sejong, King George Island, Antarctica, from 2007 to 2009. The DNA polymerase, penton base, hexon and fiber genes of the South Polar skua adenovirus (SPSAdV) exhibited 68.3%, 75.4%, 74.9% and 48.0% nucleotide sequence similarity with their counterparts in turkey hemorrhagic enteritis virus. Phylogenetic analysis based on the entire genome revealed that SPSAdV belonged to the genus Siadenovirus, family Adenoviridae. This is the first evidence of a novel adenovirus, SPSAdV, from a large polar seabird (family Stercorariidae) in Antarctica. |
format | Online Article Text |
id | pubmed-7111983 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Elsevier Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-71119832020-04-02 Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica Park, Yon Mi Kim, Jeong-Hoon Gu, Se Hun Lee, Sook Young Lee, Min-Goo Kang, Yoon Kyoo Kang, Sung-Ho Kim, Hak Jun Song, Jin-Won Virology Article Adenoviruses have been identified in humans and a wide range of vertebrate animals, but not previously from the polar region. Here, we report the entire 26,340-bp genome of a novel adenovirus, detected by PCR, in tissues of six of nine South Polar skuas (Catharacta maccormicki), collected in Lake King Sejong, King George Island, Antarctica, from 2007 to 2009. The DNA polymerase, penton base, hexon and fiber genes of the South Polar skua adenovirus (SPSAdV) exhibited 68.3%, 75.4%, 74.9% and 48.0% nucleotide sequence similarity with their counterparts in turkey hemorrhagic enteritis virus. Phylogenetic analysis based on the entire genome revealed that SPSAdV belonged to the genus Siadenovirus, family Adenoviridae. This is the first evidence of a novel adenovirus, SPSAdV, from a large polar seabird (family Stercorariidae) in Antarctica. Elsevier Inc. 2012-01-05 2011-11-10 /pmc/articles/PMC7111983/ /pubmed/22078165 http://dx.doi.org/10.1016/j.virol.2011.10.008 Text en Copyright © 2011 Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Park, Yon Mi Kim, Jeong-Hoon Gu, Se Hun Lee, Sook Young Lee, Min-Goo Kang, Yoon Kyoo Kang, Sung-Ho Kim, Hak Jun Song, Jin-Won Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica |
title | Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica |
title_full | Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica |
title_fullStr | Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica |
title_full_unstemmed | Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica |
title_short | Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica |
title_sort | full genome analysis of a novel adenovirus from the south polar skua (catharacta maccormicki) in antarctica |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7111983/ https://www.ncbi.nlm.nih.gov/pubmed/22078165 http://dx.doi.org/10.1016/j.virol.2011.10.008 |
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