Cargando…

Rapid detection of porcine parvovirus DNA by sensitive loop-mediated isothermal amplification

A method of loop-mediated isothermal amplification (LAMP) was employed to develop a rapid and simple detection system for porcine parvovirus (PPV) DNA. The amplification could be finished in 45 min under isothermal condition at 62 °C by employing a set of four primers targeting VP2 gene of PPV. LAMP...

Descripción completa

Detalles Bibliográficos
Autores principales: Chen, Hao-tai, Zhang, Jie, Yang, Sheng-hai, Ma, Li-na, Ma, Yan-ping, Liu, Xiang-tao, Cai, Xue-peng, Zhang, Yong-guang, Liu, Yong-sheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7112806/
https://www.ncbi.nlm.nih.gov/pubmed/19428576
http://dx.doi.org/10.1016/j.jviromet.2009.02.005
_version_ 1783513546686988288
author Chen, Hao-tai
Zhang, Jie
Yang, Sheng-hai
Ma, Li-na
Ma, Yan-ping
Liu, Xiang-tao
Cai, Xue-peng
Zhang, Yong-guang
Liu, Yong-sheng
author_facet Chen, Hao-tai
Zhang, Jie
Yang, Sheng-hai
Ma, Li-na
Ma, Yan-ping
Liu, Xiang-tao
Cai, Xue-peng
Zhang, Yong-guang
Liu, Yong-sheng
author_sort Chen, Hao-tai
collection PubMed
description A method of loop-mediated isothermal amplification (LAMP) was employed to develop a rapid and simple detection system for porcine parvovirus (PPV) DNA. The amplification could be finished in 45 min under isothermal condition at 62 °C by employing a set of four primers targeting VP2 gene of PPV. LAMP assay showed higher sensitivity than PCR, with a detection limit of 5 copies of PPV genomic DNA per reaction. No cross reactivity was observed from the samples of other related viruses including canine parvovirus, parvovirus B19, porcine circovirus type 1, porcine circovirus type 2 and porcine peudorabies virus. The detection rate of PPV LAMP for 125 clinical samples was 97.6% and appeared higher than that of PCR method. The result indicated the potential usefulness of the technique as a simple, rapid procedure for the detection of PPV.
format Online
Article
Text
id pubmed-7112806
institution National Center for Biotechnology Information
language English
publishDate 2009
publisher Elsevier B.V.
record_format MEDLINE/PubMed
spelling pubmed-71128062020-04-02 Rapid detection of porcine parvovirus DNA by sensitive loop-mediated isothermal amplification Chen, Hao-tai Zhang, Jie Yang, Sheng-hai Ma, Li-na Ma, Yan-ping Liu, Xiang-tao Cai, Xue-peng Zhang, Yong-guang Liu, Yong-sheng J Virol Methods Article A method of loop-mediated isothermal amplification (LAMP) was employed to develop a rapid and simple detection system for porcine parvovirus (PPV) DNA. The amplification could be finished in 45 min under isothermal condition at 62 °C by employing a set of four primers targeting VP2 gene of PPV. LAMP assay showed higher sensitivity than PCR, with a detection limit of 5 copies of PPV genomic DNA per reaction. No cross reactivity was observed from the samples of other related viruses including canine parvovirus, parvovirus B19, porcine circovirus type 1, porcine circovirus type 2 and porcine peudorabies virus. The detection rate of PPV LAMP for 125 clinical samples was 97.6% and appeared higher than that of PCR method. The result indicated the potential usefulness of the technique as a simple, rapid procedure for the detection of PPV. Elsevier B.V. 2009-06 2009-02-12 /pmc/articles/PMC7112806/ /pubmed/19428576 http://dx.doi.org/10.1016/j.jviromet.2009.02.005 Text en Copyright © 2009 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Chen, Hao-tai
Zhang, Jie
Yang, Sheng-hai
Ma, Li-na
Ma, Yan-ping
Liu, Xiang-tao
Cai, Xue-peng
Zhang, Yong-guang
Liu, Yong-sheng
Rapid detection of porcine parvovirus DNA by sensitive loop-mediated isothermal amplification
title Rapid detection of porcine parvovirus DNA by sensitive loop-mediated isothermal amplification
title_full Rapid detection of porcine parvovirus DNA by sensitive loop-mediated isothermal amplification
title_fullStr Rapid detection of porcine parvovirus DNA by sensitive loop-mediated isothermal amplification
title_full_unstemmed Rapid detection of porcine parvovirus DNA by sensitive loop-mediated isothermal amplification
title_short Rapid detection of porcine parvovirus DNA by sensitive loop-mediated isothermal amplification
title_sort rapid detection of porcine parvovirus dna by sensitive loop-mediated isothermal amplification
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7112806/
https://www.ncbi.nlm.nih.gov/pubmed/19428576
http://dx.doi.org/10.1016/j.jviromet.2009.02.005
work_keys_str_mv AT chenhaotai rapiddetectionofporcineparvovirusdnabysensitiveloopmediatedisothermalamplification
AT zhangjie rapiddetectionofporcineparvovirusdnabysensitiveloopmediatedisothermalamplification
AT yangshenghai rapiddetectionofporcineparvovirusdnabysensitiveloopmediatedisothermalamplification
AT malina rapiddetectionofporcineparvovirusdnabysensitiveloopmediatedisothermalamplification
AT mayanping rapiddetectionofporcineparvovirusdnabysensitiveloopmediatedisothermalamplification
AT liuxiangtao rapiddetectionofporcineparvovirusdnabysensitiveloopmediatedisothermalamplification
AT caixuepeng rapiddetectionofporcineparvovirusdnabysensitiveloopmediatedisothermalamplification
AT zhangyongguang rapiddetectionofporcineparvovirusdnabysensitiveloopmediatedisothermalamplification
AT liuyongsheng rapiddetectionofporcineparvovirusdnabysensitiveloopmediatedisothermalamplification