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On a Statistical Transmission Model in Analysis of the Early Phase of COVID-19 Outbreak

Since December 2019, a disease caused by a novel strain of coronavirus (COVID-19) had infected many people and the cumulative confirmed cases have reached almost 180,000 as of 17, March 2020. The COVID-19 outbreak was believed to have emerged from a seafood market in Wuhan, a metropolis city of more...

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Autores principales: Zhu, Yifan, Chen, Ying Qing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7113380/
https://www.ncbi.nlm.nih.gov/pubmed/32292527
http://dx.doi.org/10.1007/s12561-020-09277-0
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author Zhu, Yifan
Chen, Ying Qing
author_facet Zhu, Yifan
Chen, Ying Qing
author_sort Zhu, Yifan
collection PubMed
description Since December 2019, a disease caused by a novel strain of coronavirus (COVID-19) had infected many people and the cumulative confirmed cases have reached almost 180,000 as of 17, March 2020. The COVID-19 outbreak was believed to have emerged from a seafood market in Wuhan, a metropolis city of more than 11 million population in Hubei province, China. We introduced a statistical disease transmission model using case symptom onset data to estimate the transmissibility of the early-phase outbreak in China, and provided sensitivity analyses with various assumptions of disease natural history of the COVID-19. We fitted the transmission model to several publicly available sources of the outbreak data until 11, February 2020, and estimated lock down intervention efficacy of Wuhan city. The estimated [Formula: see text] was between 2.7 and 4.2 from plausible distribution assumptions of the incubation period and relative infectivity over the infectious period. 95% confidence interval of [Formula: see text] were also reported. Potential issues such as data quality concerns and comparison of different modelling approaches were discussed. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s12561-020-09277-0) contains supplementary material, which is available to authorized users.
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spelling pubmed-71133802020-04-02 On a Statistical Transmission Model in Analysis of the Early Phase of COVID-19 Outbreak Zhu, Yifan Chen, Ying Qing Stat Biosci Article Since December 2019, a disease caused by a novel strain of coronavirus (COVID-19) had infected many people and the cumulative confirmed cases have reached almost 180,000 as of 17, March 2020. The COVID-19 outbreak was believed to have emerged from a seafood market in Wuhan, a metropolis city of more than 11 million population in Hubei province, China. We introduced a statistical disease transmission model using case symptom onset data to estimate the transmissibility of the early-phase outbreak in China, and provided sensitivity analyses with various assumptions of disease natural history of the COVID-19. We fitted the transmission model to several publicly available sources of the outbreak data until 11, February 2020, and estimated lock down intervention efficacy of Wuhan city. The estimated [Formula: see text] was between 2.7 and 4.2 from plausible distribution assumptions of the incubation period and relative infectivity over the infectious period. 95% confidence interval of [Formula: see text] were also reported. Potential issues such as data quality concerns and comparison of different modelling approaches were discussed. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s12561-020-09277-0) contains supplementary material, which is available to authorized users. Springer US 2020-04-02 2021 /pmc/articles/PMC7113380/ /pubmed/32292527 http://dx.doi.org/10.1007/s12561-020-09277-0 Text en © International Chinese Statistical Association 2020 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Zhu, Yifan
Chen, Ying Qing
On a Statistical Transmission Model in Analysis of the Early Phase of COVID-19 Outbreak
title On a Statistical Transmission Model in Analysis of the Early Phase of COVID-19 Outbreak
title_full On a Statistical Transmission Model in Analysis of the Early Phase of COVID-19 Outbreak
title_fullStr On a Statistical Transmission Model in Analysis of the Early Phase of COVID-19 Outbreak
title_full_unstemmed On a Statistical Transmission Model in Analysis of the Early Phase of COVID-19 Outbreak
title_short On a Statistical Transmission Model in Analysis of the Early Phase of COVID-19 Outbreak
title_sort on a statistical transmission model in analysis of the early phase of covid-19 outbreak
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7113380/
https://www.ncbi.nlm.nih.gov/pubmed/32292527
http://dx.doi.org/10.1007/s12561-020-09277-0
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