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High reproduction number of Middle East respiratory syndrome coronavirus in nosocomial outbreaks: mathematical modelling in Saudi Arabia and South Korea

BACKGROUND: Effective countermeasures against emerging infectious diseases require an understanding of transmission rate and basic reproduction number (R(0)). R(0) for severe acute respiratory syndrome is generally considered to be >1, whereas that for Middle East respiratory syndrome (MERS) is c...

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Autores principales: Choi, S., Jung, E., Choi, B.Y., Hur, Y.J., Ki, M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Healthcare Infection Society. Published by Elsevier Ltd. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7114943/
https://www.ncbi.nlm.nih.gov/pubmed/28958834
http://dx.doi.org/10.1016/j.jhin.2017.09.017
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author Choi, S.
Jung, E.
Choi, B.Y.
Hur, Y.J.
Ki, M.
author_facet Choi, S.
Jung, E.
Choi, B.Y.
Hur, Y.J.
Ki, M.
author_sort Choi, S.
collection PubMed
description BACKGROUND: Effective countermeasures against emerging infectious diseases require an understanding of transmission rate and basic reproduction number (R(0)). R(0) for severe acute respiratory syndrome is generally considered to be >1, whereas that for Middle East respiratory syndrome (MERS) is considered to be <1. However, this does not explain the large-scale outbreaks of MERS that occurred in Kingdom of Saudi Arabia (KSA) and South Korean hospitals. Aim: To estimate R(0) in nosocomial outbreaks of MERS. METHODS: R(0) was estimated using the incidence decay with an exponential adjustment model. The KSA and Korean outbreaks were compared using a line listing of MERS cases compiled using publicly available sources. Serial intervals to estimate R(0) were assumed to be six to eight days. Study parameters [R(0) and countermeasures (d)] were estimated by fitting a model to the cumulative incidence epidemic curves using Matlab. FINDINGS: The estimated R(0) in Korea was 3.9 in the best-fit model, with a serial interval of six days. The first outbreak cluster in a hospital in Pyeongtaek had an R(0) of 4.04, and the largest outbreak cluster in a hospital in Samsung had an R(0) of 5.0. Assuming a six-day serial interval, the KSA outbreaks in Jeddah and Riyadh had R(0) values of 3.9 and 1.9, respectively. CONCLUSION: R(0) for the nosocomial MERS outbreaks in KSA and South Korea was estimated to be in the range of 2–5, which is significantly higher than the previous estimate of <1. Therefore, more comprehensive countermeasures are needed to address these infections.
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spelling pubmed-71149432020-04-02 High reproduction number of Middle East respiratory syndrome coronavirus in nosocomial outbreaks: mathematical modelling in Saudi Arabia and South Korea Choi, S. Jung, E. Choi, B.Y. Hur, Y.J. Ki, M. J Hosp Infect Article BACKGROUND: Effective countermeasures against emerging infectious diseases require an understanding of transmission rate and basic reproduction number (R(0)). R(0) for severe acute respiratory syndrome is generally considered to be >1, whereas that for Middle East respiratory syndrome (MERS) is considered to be <1. However, this does not explain the large-scale outbreaks of MERS that occurred in Kingdom of Saudi Arabia (KSA) and South Korean hospitals. Aim: To estimate R(0) in nosocomial outbreaks of MERS. METHODS: R(0) was estimated using the incidence decay with an exponential adjustment model. The KSA and Korean outbreaks were compared using a line listing of MERS cases compiled using publicly available sources. Serial intervals to estimate R(0) were assumed to be six to eight days. Study parameters [R(0) and countermeasures (d)] were estimated by fitting a model to the cumulative incidence epidemic curves using Matlab. FINDINGS: The estimated R(0) in Korea was 3.9 in the best-fit model, with a serial interval of six days. The first outbreak cluster in a hospital in Pyeongtaek had an R(0) of 4.04, and the largest outbreak cluster in a hospital in Samsung had an R(0) of 5.0. Assuming a six-day serial interval, the KSA outbreaks in Jeddah and Riyadh had R(0) values of 3.9 and 1.9, respectively. CONCLUSION: R(0) for the nosocomial MERS outbreaks in KSA and South Korea was estimated to be in the range of 2–5, which is significantly higher than the previous estimate of <1. Therefore, more comprehensive countermeasures are needed to address these infections. The Healthcare Infection Society. Published by Elsevier Ltd. 2018-06 2017-09-25 /pmc/articles/PMC7114943/ /pubmed/28958834 http://dx.doi.org/10.1016/j.jhin.2017.09.017 Text en © 2017 The Healthcare Infection Society. Published by Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Choi, S.
Jung, E.
Choi, B.Y.
Hur, Y.J.
Ki, M.
High reproduction number of Middle East respiratory syndrome coronavirus in nosocomial outbreaks: mathematical modelling in Saudi Arabia and South Korea
title High reproduction number of Middle East respiratory syndrome coronavirus in nosocomial outbreaks: mathematical modelling in Saudi Arabia and South Korea
title_full High reproduction number of Middle East respiratory syndrome coronavirus in nosocomial outbreaks: mathematical modelling in Saudi Arabia and South Korea
title_fullStr High reproduction number of Middle East respiratory syndrome coronavirus in nosocomial outbreaks: mathematical modelling in Saudi Arabia and South Korea
title_full_unstemmed High reproduction number of Middle East respiratory syndrome coronavirus in nosocomial outbreaks: mathematical modelling in Saudi Arabia and South Korea
title_short High reproduction number of Middle East respiratory syndrome coronavirus in nosocomial outbreaks: mathematical modelling in Saudi Arabia and South Korea
title_sort high reproduction number of middle east respiratory syndrome coronavirus in nosocomial outbreaks: mathematical modelling in saudi arabia and south korea
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7114943/
https://www.ncbi.nlm.nih.gov/pubmed/28958834
http://dx.doi.org/10.1016/j.jhin.2017.09.017
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