Cargando…

Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects

Radiotherapy is an effective treatment for local solid tumors, but the mechanism of damage to human body caused by radiation therapy needs further study. In this study, gene expression profiles of human peripheral blood samples exposed to different doses and rates of ionizing radiation (IR) were use...

Descripción completa

Detalles Bibliográficos
Autores principales: He, Guangyao, Tang, Anzhou, Xie, Mao, Xia, Wei, Zhao, Pengcheng, Wei, Jianglian, Lai, Yongjing, Tang, Xianglong, Zou, Yi Ming, Liu, Heng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7119240/
https://www.ncbi.nlm.nih.gov/pubmed/32284698
http://dx.doi.org/10.1177/1559325820914184
_version_ 1783514736874225664
author He, Guangyao
Tang, Anzhou
Xie, Mao
Xia, Wei
Zhao, Pengcheng
Wei, Jianglian
Lai, Yongjing
Tang, Xianglong
Zou, Yi Ming
Liu, Heng
author_facet He, Guangyao
Tang, Anzhou
Xie, Mao
Xia, Wei
Zhao, Pengcheng
Wei, Jianglian
Lai, Yongjing
Tang, Xianglong
Zou, Yi Ming
Liu, Heng
author_sort He, Guangyao
collection PubMed
description Radiotherapy is an effective treatment for local solid tumors, but the mechanism of damage to human body caused by radiation therapy needs further study. In this study, gene expression profiles of human peripheral blood samples exposed to different doses and rates of ionizing radiation (IR) were used for bioinformatics analysis to investigate the mechanism of IR damage and radiation-induced bystander effect (RIBE). Differentially expressed genes analysis, weighted gene correlation network analysis, functional enrichment analysis, hypergeometric test, gene set enrichment analysis, and gene set variation analysis were applied to analyze the data. Moreover, receiver operating characteristic curve analysis was performed to identify core genes of IR damage. Weighted gene correlation network analysis identified 3 modules associated with IR damage, 2 were positively correlated and 1 was negatively correlated. The analysis showed that the positively correlated modules were significantly involved in apoptosis and p53 signaling pathway, and ESR1, ATM, and MYC were potential transcription factors regulating these modules. Thus, the study suggested that apoptosis and p53 signaling pathway may be the potential molecular mechanisms of IR damage and RIBE, which could be driven by ESR1, ATM, and MYC.
format Online
Article
Text
id pubmed-7119240
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher SAGE Publications
record_format MEDLINE/PubMed
spelling pubmed-71192402020-04-13 Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects He, Guangyao Tang, Anzhou Xie, Mao Xia, Wei Zhao, Pengcheng Wei, Jianglian Lai, Yongjing Tang, Xianglong Zou, Yi Ming Liu, Heng Dose Response Original Article Radiotherapy is an effective treatment for local solid tumors, but the mechanism of damage to human body caused by radiation therapy needs further study. In this study, gene expression profiles of human peripheral blood samples exposed to different doses and rates of ionizing radiation (IR) were used for bioinformatics analysis to investigate the mechanism of IR damage and radiation-induced bystander effect (RIBE). Differentially expressed genes analysis, weighted gene correlation network analysis, functional enrichment analysis, hypergeometric test, gene set enrichment analysis, and gene set variation analysis were applied to analyze the data. Moreover, receiver operating characteristic curve analysis was performed to identify core genes of IR damage. Weighted gene correlation network analysis identified 3 modules associated with IR damage, 2 were positively correlated and 1 was negatively correlated. The analysis showed that the positively correlated modules were significantly involved in apoptosis and p53 signaling pathway, and ESR1, ATM, and MYC were potential transcription factors regulating these modules. Thus, the study suggested that apoptosis and p53 signaling pathway may be the potential molecular mechanisms of IR damage and RIBE, which could be driven by ESR1, ATM, and MYC. SAGE Publications 2020-03-30 /pmc/articles/PMC7119240/ /pubmed/32284698 http://dx.doi.org/10.1177/1559325820914184 Text en © The Author(s) 2020 https://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Original Article
He, Guangyao
Tang, Anzhou
Xie, Mao
Xia, Wei
Zhao, Pengcheng
Wei, Jianglian
Lai, Yongjing
Tang, Xianglong
Zou, Yi Ming
Liu, Heng
Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects
title Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects
title_full Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects
title_fullStr Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects
title_full_unstemmed Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects
title_short Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects
title_sort blood gene expression profile study revealed the activation of apoptosis and p53 signaling pathway may be the potential molecular mechanisms of ionizing radiation damage and radiation-induced bystander effects
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7119240/
https://www.ncbi.nlm.nih.gov/pubmed/32284698
http://dx.doi.org/10.1177/1559325820914184
work_keys_str_mv AT heguangyao bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects
AT tanganzhou bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects
AT xiemao bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects
AT xiawei bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects
AT zhaopengcheng bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects
AT weijianglian bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects
AT laiyongjing bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects
AT tangxianglong bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects
AT zouyiming bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects
AT liuheng bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects