Cargando…
Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects
Radiotherapy is an effective treatment for local solid tumors, but the mechanism of damage to human body caused by radiation therapy needs further study. In this study, gene expression profiles of human peripheral blood samples exposed to different doses and rates of ionizing radiation (IR) were use...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7119240/ https://www.ncbi.nlm.nih.gov/pubmed/32284698 http://dx.doi.org/10.1177/1559325820914184 |
_version_ | 1783514736874225664 |
---|---|
author | He, Guangyao Tang, Anzhou Xie, Mao Xia, Wei Zhao, Pengcheng Wei, Jianglian Lai, Yongjing Tang, Xianglong Zou, Yi Ming Liu, Heng |
author_facet | He, Guangyao Tang, Anzhou Xie, Mao Xia, Wei Zhao, Pengcheng Wei, Jianglian Lai, Yongjing Tang, Xianglong Zou, Yi Ming Liu, Heng |
author_sort | He, Guangyao |
collection | PubMed |
description | Radiotherapy is an effective treatment for local solid tumors, but the mechanism of damage to human body caused by radiation therapy needs further study. In this study, gene expression profiles of human peripheral blood samples exposed to different doses and rates of ionizing radiation (IR) were used for bioinformatics analysis to investigate the mechanism of IR damage and radiation-induced bystander effect (RIBE). Differentially expressed genes analysis, weighted gene correlation network analysis, functional enrichment analysis, hypergeometric test, gene set enrichment analysis, and gene set variation analysis were applied to analyze the data. Moreover, receiver operating characteristic curve analysis was performed to identify core genes of IR damage. Weighted gene correlation network analysis identified 3 modules associated with IR damage, 2 were positively correlated and 1 was negatively correlated. The analysis showed that the positively correlated modules were significantly involved in apoptosis and p53 signaling pathway, and ESR1, ATM, and MYC were potential transcription factors regulating these modules. Thus, the study suggested that apoptosis and p53 signaling pathway may be the potential molecular mechanisms of IR damage and RIBE, which could be driven by ESR1, ATM, and MYC. |
format | Online Article Text |
id | pubmed-7119240 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-71192402020-04-13 Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects He, Guangyao Tang, Anzhou Xie, Mao Xia, Wei Zhao, Pengcheng Wei, Jianglian Lai, Yongjing Tang, Xianglong Zou, Yi Ming Liu, Heng Dose Response Original Article Radiotherapy is an effective treatment for local solid tumors, but the mechanism of damage to human body caused by radiation therapy needs further study. In this study, gene expression profiles of human peripheral blood samples exposed to different doses and rates of ionizing radiation (IR) were used for bioinformatics analysis to investigate the mechanism of IR damage and radiation-induced bystander effect (RIBE). Differentially expressed genes analysis, weighted gene correlation network analysis, functional enrichment analysis, hypergeometric test, gene set enrichment analysis, and gene set variation analysis were applied to analyze the data. Moreover, receiver operating characteristic curve analysis was performed to identify core genes of IR damage. Weighted gene correlation network analysis identified 3 modules associated with IR damage, 2 were positively correlated and 1 was negatively correlated. The analysis showed that the positively correlated modules were significantly involved in apoptosis and p53 signaling pathway, and ESR1, ATM, and MYC were potential transcription factors regulating these modules. Thus, the study suggested that apoptosis and p53 signaling pathway may be the potential molecular mechanisms of IR damage and RIBE, which could be driven by ESR1, ATM, and MYC. SAGE Publications 2020-03-30 /pmc/articles/PMC7119240/ /pubmed/32284698 http://dx.doi.org/10.1177/1559325820914184 Text en © The Author(s) 2020 https://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Original Article He, Guangyao Tang, Anzhou Xie, Mao Xia, Wei Zhao, Pengcheng Wei, Jianglian Lai, Yongjing Tang, Xianglong Zou, Yi Ming Liu, Heng Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects |
title | Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects |
title_full | Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects |
title_fullStr | Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects |
title_full_unstemmed | Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects |
title_short | Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects |
title_sort | blood gene expression profile study revealed the activation of apoptosis and p53 signaling pathway may be the potential molecular mechanisms of ionizing radiation damage and radiation-induced bystander effects |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7119240/ https://www.ncbi.nlm.nih.gov/pubmed/32284698 http://dx.doi.org/10.1177/1559325820914184 |
work_keys_str_mv | AT heguangyao bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects AT tanganzhou bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects AT xiemao bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects AT xiawei bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects AT zhaopengcheng bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects AT weijianglian bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects AT laiyongjing bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects AT tangxianglong bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects AT zouyiming bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects AT liuheng bloodgeneexpressionprofilestudyrevealedtheactivationofapoptosisandp53signalingpathwaymaybethepotentialmolecularmechanismsofionizingradiationdamageandradiationinducedbystandereffects |