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Comparison of the “ProDect BCS RV CHIP” assay with the combination of shell vial cell culture and immunofluorescence antibody test for the detection of respiratory viruses

In the present study, a multiplex reverse transcriptase polymerase chain reaction combined with a chip hybridization assay (ProDect BCS RV CHIP) was evaluated as an alternative to the combination of immunofluorescent antibody test and shell vial cell culture considered as gold standard for the detec...

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Autores principales: Çiçek, Candan, Gülen, Figen, Karataş, Eylem, Demir, Esen, Tanaç, Remziye, Bacakoğlu, Feza, Bilgiç, Altınay
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2007
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7119819/
https://www.ncbi.nlm.nih.gov/pubmed/17433455
http://dx.doi.org/10.1016/j.jviromet.2007.03.003
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author Çiçek, Candan
Gülen, Figen
Karataş, Eylem
Demir, Esen
Tanaç, Remziye
Bacakoğlu, Feza
Bilgiç, Altınay
author_facet Çiçek, Candan
Gülen, Figen
Karataş, Eylem
Demir, Esen
Tanaç, Remziye
Bacakoğlu, Feza
Bilgiç, Altınay
author_sort Çiçek, Candan
collection PubMed
description In the present study, a multiplex reverse transcriptase polymerase chain reaction combined with a chip hybridization assay (ProDect BCS RV CHIP) was evaluated as an alternative to the combination of immunofluorescent antibody test and shell vial cell culture considered as gold standard for the detection of respiratory viruses. Among 100 specimens, 40 were positive using the combination of immunofluorescent antibody test and shell vial cell culture assay in which 9 of them were infected by two different viruses (27 parainfluenza virus type 3, 10 adenovirus, 9 respiratory syncytial virus, 2 influenza type B, and 1 influenza type A). ProDect BCS RV CHIP detected only 10 positive specimens in which one of them was infected by two different viruses (5 respiratory syncytial virus, 3 parainfluenza virus type 3, 2 adenovirus, and 1 influenza virus type B). The sensitivity, specificity, PPV, NPV, and diagnostic accuracy of ProDect BCS RV CHIP were 25.0%, 100%, 100%, 66.6%, and 70.0%, respectively, compared to the combination of shell vial cell culture and immunofluorescent antibody test. As a result, the specificity of ProDect BCS RV CHIP is high, however, the sensitivity (25%) of the assay is not sufficient for routine laboratory use.
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spelling pubmed-71198192020-04-08 Comparison of the “ProDect BCS RV CHIP” assay with the combination of shell vial cell culture and immunofluorescence antibody test for the detection of respiratory viruses Çiçek, Candan Gülen, Figen Karataş, Eylem Demir, Esen Tanaç, Remziye Bacakoğlu, Feza Bilgiç, Altınay J Virol Methods Article In the present study, a multiplex reverse transcriptase polymerase chain reaction combined with a chip hybridization assay (ProDect BCS RV CHIP) was evaluated as an alternative to the combination of immunofluorescent antibody test and shell vial cell culture considered as gold standard for the detection of respiratory viruses. Among 100 specimens, 40 were positive using the combination of immunofluorescent antibody test and shell vial cell culture assay in which 9 of them were infected by two different viruses (27 parainfluenza virus type 3, 10 adenovirus, 9 respiratory syncytial virus, 2 influenza type B, and 1 influenza type A). ProDect BCS RV CHIP detected only 10 positive specimens in which one of them was infected by two different viruses (5 respiratory syncytial virus, 3 parainfluenza virus type 3, 2 adenovirus, and 1 influenza virus type B). The sensitivity, specificity, PPV, NPV, and diagnostic accuracy of ProDect BCS RV CHIP were 25.0%, 100%, 100%, 66.6%, and 70.0%, respectively, compared to the combination of shell vial cell culture and immunofluorescent antibody test. As a result, the specificity of ProDect BCS RV CHIP is high, however, the sensitivity (25%) of the assay is not sufficient for routine laboratory use. Elsevier B.V. 2007-08 2007-04-12 /pmc/articles/PMC7119819/ /pubmed/17433455 http://dx.doi.org/10.1016/j.jviromet.2007.03.003 Text en Copyright © 2007 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Çiçek, Candan
Gülen, Figen
Karataş, Eylem
Demir, Esen
Tanaç, Remziye
Bacakoğlu, Feza
Bilgiç, Altınay
Comparison of the “ProDect BCS RV CHIP” assay with the combination of shell vial cell culture and immunofluorescence antibody test for the detection of respiratory viruses
title Comparison of the “ProDect BCS RV CHIP” assay with the combination of shell vial cell culture and immunofluorescence antibody test for the detection of respiratory viruses
title_full Comparison of the “ProDect BCS RV CHIP” assay with the combination of shell vial cell culture and immunofluorescence antibody test for the detection of respiratory viruses
title_fullStr Comparison of the “ProDect BCS RV CHIP” assay with the combination of shell vial cell culture and immunofluorescence antibody test for the detection of respiratory viruses
title_full_unstemmed Comparison of the “ProDect BCS RV CHIP” assay with the combination of shell vial cell culture and immunofluorescence antibody test for the detection of respiratory viruses
title_short Comparison of the “ProDect BCS RV CHIP” assay with the combination of shell vial cell culture and immunofluorescence antibody test for the detection of respiratory viruses
title_sort comparison of the “prodect bcs rv chip” assay with the combination of shell vial cell culture and immunofluorescence antibody test for the detection of respiratory viruses
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7119819/
https://www.ncbi.nlm.nih.gov/pubmed/17433455
http://dx.doi.org/10.1016/j.jviromet.2007.03.003
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