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Epidemics with mutating infectivity on small-world networks

Epidemics and evolution of many pathogens occur on similar timescales so that their dynamics are often entangled. Here, in a first step to study this problem theoretically, we analyze mutating pathogens spreading on simple SIR networks with grid-like connectivity. We have in mind the spatial aspect...

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Autores principales: Rüdiger, Sten, Plietzsch, Anton, Sagués, Francesc, Sokolov, Igor M., Kurths, Jürgen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7125191/
https://www.ncbi.nlm.nih.gov/pubmed/32246023
http://dx.doi.org/10.1038/s41598-020-62597-5
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author Rüdiger, Sten
Plietzsch, Anton
Sagués, Francesc
Sokolov, Igor M.
Kurths, Jürgen
author_facet Rüdiger, Sten
Plietzsch, Anton
Sagués, Francesc
Sokolov, Igor M.
Kurths, Jürgen
author_sort Rüdiger, Sten
collection PubMed
description Epidemics and evolution of many pathogens occur on similar timescales so that their dynamics are often entangled. Here, in a first step to study this problem theoretically, we analyze mutating pathogens spreading on simple SIR networks with grid-like connectivity. We have in mind the spatial aspect of epidemics, which often advance on transport links between hosts or groups of hosts such as cities or countries. We focus on the case of mutations that enhance an agent’s infection rate. We uncover that the small-world property, i.e., the presence of long-range connections, makes the network very vulnerable, supporting frequent supercritical mutations and bringing the network from disease extinction to full blown epidemic. For very large numbers of long-range links, however, the effect reverses and we find a reduced chance for large outbreaks. We study two cases, one with discrete number of mutational steps and one with a continuous genetic variable, and we analyze various scaling regimes. For the continuous case we derive a Fokker-Planck-like equation for the probability density and solve it for small numbers of shortcuts using the WKB approximation. Our analysis supports the claims that a potentiating mutation in the transmissibility might occur during an epidemic wave and not necessarily before its initiation.
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spelling pubmed-71251912020-04-08 Epidemics with mutating infectivity on small-world networks Rüdiger, Sten Plietzsch, Anton Sagués, Francesc Sokolov, Igor M. Kurths, Jürgen Sci Rep Article Epidemics and evolution of many pathogens occur on similar timescales so that their dynamics are often entangled. Here, in a first step to study this problem theoretically, we analyze mutating pathogens spreading on simple SIR networks with grid-like connectivity. We have in mind the spatial aspect of epidemics, which often advance on transport links between hosts or groups of hosts such as cities or countries. We focus on the case of mutations that enhance an agent’s infection rate. We uncover that the small-world property, i.e., the presence of long-range connections, makes the network very vulnerable, supporting frequent supercritical mutations and bringing the network from disease extinction to full blown epidemic. For very large numbers of long-range links, however, the effect reverses and we find a reduced chance for large outbreaks. We study two cases, one with discrete number of mutational steps and one with a continuous genetic variable, and we analyze various scaling regimes. For the continuous case we derive a Fokker-Planck-like equation for the probability density and solve it for small numbers of shortcuts using the WKB approximation. Our analysis supports the claims that a potentiating mutation in the transmissibility might occur during an epidemic wave and not necessarily before its initiation. Nature Publishing Group UK 2020-04-03 /pmc/articles/PMC7125191/ /pubmed/32246023 http://dx.doi.org/10.1038/s41598-020-62597-5 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Rüdiger, Sten
Plietzsch, Anton
Sagués, Francesc
Sokolov, Igor M.
Kurths, Jürgen
Epidemics with mutating infectivity on small-world networks
title Epidemics with mutating infectivity on small-world networks
title_full Epidemics with mutating infectivity on small-world networks
title_fullStr Epidemics with mutating infectivity on small-world networks
title_full_unstemmed Epidemics with mutating infectivity on small-world networks
title_short Epidemics with mutating infectivity on small-world networks
title_sort epidemics with mutating infectivity on small-world networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7125191/
https://www.ncbi.nlm.nih.gov/pubmed/32246023
http://dx.doi.org/10.1038/s41598-020-62597-5
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