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Exploring the configuration spaces of surface materials using time-dependent diffraction patterns and unsupervised learning
Computational methods for exploring the atomic configuration spaces of surface materials will lead to breakthroughs in nanotechnology and beyond. In order to develop such methods, especially ones utilizing machine learning approaches, descriptors which encode the structural features of the candidate...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7125295/ https://www.ncbi.nlm.nih.gov/pubmed/32246027 http://dx.doi.org/10.1038/s41598-020-62782-6 |
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author | Packwood, Daniel M. |
author_facet | Packwood, Daniel M. |
author_sort | Packwood, Daniel M. |
collection | PubMed |
description | Computational methods for exploring the atomic configuration spaces of surface materials will lead to breakthroughs in nanotechnology and beyond. In order to develop such methods, especially ones utilizing machine learning approaches, descriptors which encode the structural features of the candidate configurations are required. In this paper, we propose the use of time-dependent electron diffraction simulations to create descriptors for the configurations of surface materials. Our proposal utilizes the fact that the sub-femtosecond time-dependence of electron diffraction patterns are highly sensitive to the arrangement of atoms in the surface region of the material, allowing one to distinguish configurations which possess identical symmetry but differ in the locations of the atoms in the unit cell. We demonstrate the effectiveness of this approach by considering the simple cases of copper(111) and an organic self-assembled monolayer system, and use it to search for metastable configurations of these materials. |
format | Online Article Text |
id | pubmed-7125295 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-71252952020-04-11 Exploring the configuration spaces of surface materials using time-dependent diffraction patterns and unsupervised learning Packwood, Daniel M. Sci Rep Article Computational methods for exploring the atomic configuration spaces of surface materials will lead to breakthroughs in nanotechnology and beyond. In order to develop such methods, especially ones utilizing machine learning approaches, descriptors which encode the structural features of the candidate configurations are required. In this paper, we propose the use of time-dependent electron diffraction simulations to create descriptors for the configurations of surface materials. Our proposal utilizes the fact that the sub-femtosecond time-dependence of electron diffraction patterns are highly sensitive to the arrangement of atoms in the surface region of the material, allowing one to distinguish configurations which possess identical symmetry but differ in the locations of the atoms in the unit cell. We demonstrate the effectiveness of this approach by considering the simple cases of copper(111) and an organic self-assembled monolayer system, and use it to search for metastable configurations of these materials. Nature Publishing Group UK 2020-04-03 /pmc/articles/PMC7125295/ /pubmed/32246027 http://dx.doi.org/10.1038/s41598-020-62782-6 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Packwood, Daniel M. Exploring the configuration spaces of surface materials using time-dependent diffraction patterns and unsupervised learning |
title | Exploring the configuration spaces of surface materials using time-dependent diffraction patterns and unsupervised learning |
title_full | Exploring the configuration spaces of surface materials using time-dependent diffraction patterns and unsupervised learning |
title_fullStr | Exploring the configuration spaces of surface materials using time-dependent diffraction patterns and unsupervised learning |
title_full_unstemmed | Exploring the configuration spaces of surface materials using time-dependent diffraction patterns and unsupervised learning |
title_short | Exploring the configuration spaces of surface materials using time-dependent diffraction patterns and unsupervised learning |
title_sort | exploring the configuration spaces of surface materials using time-dependent diffraction patterns and unsupervised learning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7125295/ https://www.ncbi.nlm.nih.gov/pubmed/32246027 http://dx.doi.org/10.1038/s41598-020-62782-6 |
work_keys_str_mv | AT packwooddanielm exploringtheconfigurationspacesofsurfacematerialsusingtimedependentdiffractionpatternsandunsupervisedlearning |