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Automated calculation of spectral-reflectance marker-points to enable analysis of plant colour-signalling to pollinators

A spectral reflectance curve for a coloured surface can be constructed from a set of radiation reflectance value measurements made across the spectrum at discrete wavelengths. The curve gives an indication of the pattern of light entering the eye of an organism viewing an illuminated object. Marker...

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Detalles Bibliográficos
Autores principales: Dorin, Alan, Shrestha, Mani, Herrmann, Matthieu, Burd, Martin, Dyer, Adrian G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7125344/
https://www.ncbi.nlm.nih.gov/pubmed/32257838
http://dx.doi.org/10.1016/j.mex.2020.100827
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author Dorin, Alan
Shrestha, Mani
Herrmann, Matthieu
Burd, Martin
Dyer, Adrian G.
author_facet Dorin, Alan
Shrestha, Mani
Herrmann, Matthieu
Burd, Martin
Dyer, Adrian G.
author_sort Dorin, Alan
collection PubMed
description A spectral reflectance curve for a coloured surface can be constructed from a set of radiation reflectance value measurements made across the spectrum at discrete wavelengths. The curve gives an indication of the pattern of light entering the eye of an organism viewing an illuminated object. Marker points represent the positions along a reflectance curve at which sharp transitions in reflectance occur, these being potentially important to visual perception, for instance by insects discriminating between two flowers, each of a different colour. Consequently, methods of marker point analysis have been applied in several studies evaluating flower colours. These studies have sometimes required researchers to place marker points on reflectance curves by eye, or they have used algorithms written as unreleased software. To automate the process systematically and provide open access, we implemented special-purpose software in C++. Below we provide a summary of the approach adopted in our implementation and made available online in a port to TypeScript. The main benefits of our method are summarized as being: • Automation and repeatability. • Standardisation, cross-platform compatibility and Open Access. • Interactive exploration of the effects of parameter variation.
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spelling pubmed-71253442020-04-06 Automated calculation of spectral-reflectance marker-points to enable analysis of plant colour-signalling to pollinators Dorin, Alan Shrestha, Mani Herrmann, Matthieu Burd, Martin Dyer, Adrian G. MethodsX Agricultural and Biological Science A spectral reflectance curve for a coloured surface can be constructed from a set of radiation reflectance value measurements made across the spectrum at discrete wavelengths. The curve gives an indication of the pattern of light entering the eye of an organism viewing an illuminated object. Marker points represent the positions along a reflectance curve at which sharp transitions in reflectance occur, these being potentially important to visual perception, for instance by insects discriminating between two flowers, each of a different colour. Consequently, methods of marker point analysis have been applied in several studies evaluating flower colours. These studies have sometimes required researchers to place marker points on reflectance curves by eye, or they have used algorithms written as unreleased software. To automate the process systematically and provide open access, we implemented special-purpose software in C++. Below we provide a summary of the approach adopted in our implementation and made available online in a port to TypeScript. The main benefits of our method are summarized as being: • Automation and repeatability. • Standardisation, cross-platform compatibility and Open Access. • Interactive exploration of the effects of parameter variation. Elsevier 2020-02-21 /pmc/articles/PMC7125344/ /pubmed/32257838 http://dx.doi.org/10.1016/j.mex.2020.100827 Text en © 2020 The Authors. Published by Elsevier B.V. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Agricultural and Biological Science
Dorin, Alan
Shrestha, Mani
Herrmann, Matthieu
Burd, Martin
Dyer, Adrian G.
Automated calculation of spectral-reflectance marker-points to enable analysis of plant colour-signalling to pollinators
title Automated calculation of spectral-reflectance marker-points to enable analysis of plant colour-signalling to pollinators
title_full Automated calculation of spectral-reflectance marker-points to enable analysis of plant colour-signalling to pollinators
title_fullStr Automated calculation of spectral-reflectance marker-points to enable analysis of plant colour-signalling to pollinators
title_full_unstemmed Automated calculation of spectral-reflectance marker-points to enable analysis of plant colour-signalling to pollinators
title_short Automated calculation of spectral-reflectance marker-points to enable analysis of plant colour-signalling to pollinators
title_sort automated calculation of spectral-reflectance marker-points to enable analysis of plant colour-signalling to pollinators
topic Agricultural and Biological Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7125344/
https://www.ncbi.nlm.nih.gov/pubmed/32257838
http://dx.doi.org/10.1016/j.mex.2020.100827
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