Cargando…

A phylogenomic approach reveals a low somatic mutation rate in a long-lived plant

Somatic mutations can have important effects on the life history, ecology, and evolution of plants, but the rate at which they accumulate is poorly understood and difficult to measure directly. Here, we develop a method to measure somatic mutations in individual plants and use it to estimate the som...

Descripción completa

Detalles Bibliográficos
Autores principales: Orr, Adam J., Padovan, Amanda, Kainer, David, Külheim, Carsten, Bromham, Lindell, Bustos-Segura, Carlos, Foley, William, Haff, Tonya, Hsieh, Ji-Fan, Morales-Suarez, Alejandro, Cartwright, Reed A., Lanfear, Robert
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126060/
https://www.ncbi.nlm.nih.gov/pubmed/32156194
http://dx.doi.org/10.1098/rspb.2019.2364
_version_ 1783516071425212416
author Orr, Adam J.
Padovan, Amanda
Kainer, David
Külheim, Carsten
Bromham, Lindell
Bustos-Segura, Carlos
Foley, William
Haff, Tonya
Hsieh, Ji-Fan
Morales-Suarez, Alejandro
Cartwright, Reed A.
Lanfear, Robert
author_facet Orr, Adam J.
Padovan, Amanda
Kainer, David
Külheim, Carsten
Bromham, Lindell
Bustos-Segura, Carlos
Foley, William
Haff, Tonya
Hsieh, Ji-Fan
Morales-Suarez, Alejandro
Cartwright, Reed A.
Lanfear, Robert
author_sort Orr, Adam J.
collection PubMed
description Somatic mutations can have important effects on the life history, ecology, and evolution of plants, but the rate at which they accumulate is poorly understood and difficult to measure directly. Here, we develop a method to measure somatic mutations in individual plants and use it to estimate the somatic mutation rate in a large, long-lived, phenotypically mosaic Eucalyptus melliodora tree. Despite being 100 times larger than Arabidopsis, this tree has a per-generation mutation rate only ten times greater, which suggests that this species may have evolved mechanisms to reduce the mutation rate per unit of growth. This adds to a growing body of evidence that illuminates the correlated evolutionary shifts in mutation rate and life history in plants.
format Online
Article
Text
id pubmed-7126060
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher The Royal Society
record_format MEDLINE/PubMed
spelling pubmed-71260602020-04-06 A phylogenomic approach reveals a low somatic mutation rate in a long-lived plant Orr, Adam J. Padovan, Amanda Kainer, David Külheim, Carsten Bromham, Lindell Bustos-Segura, Carlos Foley, William Haff, Tonya Hsieh, Ji-Fan Morales-Suarez, Alejandro Cartwright, Reed A. Lanfear, Robert Proc Biol Sci Evolution Somatic mutations can have important effects on the life history, ecology, and evolution of plants, but the rate at which they accumulate is poorly understood and difficult to measure directly. Here, we develop a method to measure somatic mutations in individual plants and use it to estimate the somatic mutation rate in a large, long-lived, phenotypically mosaic Eucalyptus melliodora tree. Despite being 100 times larger than Arabidopsis, this tree has a per-generation mutation rate only ten times greater, which suggests that this species may have evolved mechanisms to reduce the mutation rate per unit of growth. This adds to a growing body of evidence that illuminates the correlated evolutionary shifts in mutation rate and life history in plants. The Royal Society 2020-03-11 2020-03-11 /pmc/articles/PMC7126060/ /pubmed/32156194 http://dx.doi.org/10.1098/rspb.2019.2364 Text en © 2020 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.
spellingShingle Evolution
Orr, Adam J.
Padovan, Amanda
Kainer, David
Külheim, Carsten
Bromham, Lindell
Bustos-Segura, Carlos
Foley, William
Haff, Tonya
Hsieh, Ji-Fan
Morales-Suarez, Alejandro
Cartwright, Reed A.
Lanfear, Robert
A phylogenomic approach reveals a low somatic mutation rate in a long-lived plant
title A phylogenomic approach reveals a low somatic mutation rate in a long-lived plant
title_full A phylogenomic approach reveals a low somatic mutation rate in a long-lived plant
title_fullStr A phylogenomic approach reveals a low somatic mutation rate in a long-lived plant
title_full_unstemmed A phylogenomic approach reveals a low somatic mutation rate in a long-lived plant
title_short A phylogenomic approach reveals a low somatic mutation rate in a long-lived plant
title_sort phylogenomic approach reveals a low somatic mutation rate in a long-lived plant
topic Evolution
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126060/
https://www.ncbi.nlm.nih.gov/pubmed/32156194
http://dx.doi.org/10.1098/rspb.2019.2364
work_keys_str_mv AT orradamj aphylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT padovanamanda aphylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT kainerdavid aphylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT kulheimcarsten aphylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT bromhamlindell aphylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT bustosseguracarlos aphylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT foleywilliam aphylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT hafftonya aphylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT hsiehjifan aphylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT moralessuarezalejandro aphylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT cartwrightreeda aphylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT lanfearrobert aphylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT orradamj phylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT padovanamanda phylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT kainerdavid phylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT kulheimcarsten phylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT bromhamlindell phylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT bustosseguracarlos phylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT foleywilliam phylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT hafftonya phylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT hsiehjifan phylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT moralessuarezalejandro phylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT cartwrightreeda phylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant
AT lanfearrobert phylogenomicapproachrevealsalowsomaticmutationrateinalonglivedplant