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Genomic analysis of HAdV-B14 isolate from the outbreak of febrile respiratory infection in China

Human adenovirus type 14 (HAdV-B14) was first reported in 1955 from the Netherlands and since then had been associated with outbreaks of febrile respiratory illness (FRI). In China, sporadic HAdV-B14 infections were first identified in 2010, in Guangzhou and Beijing. In 2012, an outbreak of FRI occu...

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Autores principales: Mi, Zhiqiang, Butt, Azeem Mehmood, An, Xiaoping, Jiang, Tao, Liu, Wei, Qin, Chengfeng, Cao, Wu-Chun, Tong, Yigang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Inc. 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126778/
https://www.ncbi.nlm.nih.gov/pubmed/24055951
http://dx.doi.org/10.1016/j.ygeno.2013.09.001
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author Mi, Zhiqiang
Butt, Azeem Mehmood
An, Xiaoping
Jiang, Tao
Liu, Wei
Qin, Chengfeng
Cao, Wu-Chun
Tong, Yigang
author_facet Mi, Zhiqiang
Butt, Azeem Mehmood
An, Xiaoping
Jiang, Tao
Liu, Wei
Qin, Chengfeng
Cao, Wu-Chun
Tong, Yigang
author_sort Mi, Zhiqiang
collection PubMed
description Human adenovirus type 14 (HAdV-B14) was first reported in 1955 from the Netherlands and since then had been associated with outbreaks of febrile respiratory illness (FRI). In China, sporadic HAdV-B14 infections were first identified in 2010, in Guangzhou and Beijing. In 2012, an outbreak of FRI occurred in Beijing and the etiological agent was determined to be HAdV-B14. We present a complete HAdV-B14 genome sequence isolated from this recent FRI outbreak. Virus in 30 throat swab samples was detected using polymerase chain reaction assays, and confirmed by sequencing of the fiber, hexon and penton genes. Comparative genomics and phylogenetic analysis showed that the newly isolated HAdV-B14 (HAdV-B14 CHN) shared highest sequence homology with a 2006 isolate from the United States and clustered closely with other HAdV-B14 strains. It is expected that data from the present study will help in devising better protocols for virus surveillance, and in developing preventative measures.
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spelling pubmed-71267782020-04-08 Genomic analysis of HAdV-B14 isolate from the outbreak of febrile respiratory infection in China Mi, Zhiqiang Butt, Azeem Mehmood An, Xiaoping Jiang, Tao Liu, Wei Qin, Chengfeng Cao, Wu-Chun Tong, Yigang Genomics Article Human adenovirus type 14 (HAdV-B14) was first reported in 1955 from the Netherlands and since then had been associated with outbreaks of febrile respiratory illness (FRI). In China, sporadic HAdV-B14 infections were first identified in 2010, in Guangzhou and Beijing. In 2012, an outbreak of FRI occurred in Beijing and the etiological agent was determined to be HAdV-B14. We present a complete HAdV-B14 genome sequence isolated from this recent FRI outbreak. Virus in 30 throat swab samples was detected using polymerase chain reaction assays, and confirmed by sequencing of the fiber, hexon and penton genes. Comparative genomics and phylogenetic analysis showed that the newly isolated HAdV-B14 (HAdV-B14 CHN) shared highest sequence homology with a 2006 isolate from the United States and clustered closely with other HAdV-B14 strains. It is expected that data from the present study will help in devising better protocols for virus surveillance, and in developing preventative measures. Elsevier Inc. 2013 2013-09-20 /pmc/articles/PMC7126778/ /pubmed/24055951 http://dx.doi.org/10.1016/j.ygeno.2013.09.001 Text en Copyright © 2013 Elsevier Inc. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Mi, Zhiqiang
Butt, Azeem Mehmood
An, Xiaoping
Jiang, Tao
Liu, Wei
Qin, Chengfeng
Cao, Wu-Chun
Tong, Yigang
Genomic analysis of HAdV-B14 isolate from the outbreak of febrile respiratory infection in China
title Genomic analysis of HAdV-B14 isolate from the outbreak of febrile respiratory infection in China
title_full Genomic analysis of HAdV-B14 isolate from the outbreak of febrile respiratory infection in China
title_fullStr Genomic analysis of HAdV-B14 isolate from the outbreak of febrile respiratory infection in China
title_full_unstemmed Genomic analysis of HAdV-B14 isolate from the outbreak of febrile respiratory infection in China
title_short Genomic analysis of HAdV-B14 isolate from the outbreak of febrile respiratory infection in China
title_sort genomic analysis of hadv-b14 isolate from the outbreak of febrile respiratory infection in china
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126778/
https://www.ncbi.nlm.nih.gov/pubmed/24055951
http://dx.doi.org/10.1016/j.ygeno.2013.09.001
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