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Genomic analysis of HAdV-B14 isolate from the outbreak of febrile respiratory infection in China
Human adenovirus type 14 (HAdV-B14) was first reported in 1955 from the Netherlands and since then had been associated with outbreaks of febrile respiratory illness (FRI). In China, sporadic HAdV-B14 infections were first identified in 2010, in Guangzhou and Beijing. In 2012, an outbreak of FRI occu...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier Inc.
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126778/ https://www.ncbi.nlm.nih.gov/pubmed/24055951 http://dx.doi.org/10.1016/j.ygeno.2013.09.001 |
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author | Mi, Zhiqiang Butt, Azeem Mehmood An, Xiaoping Jiang, Tao Liu, Wei Qin, Chengfeng Cao, Wu-Chun Tong, Yigang |
author_facet | Mi, Zhiqiang Butt, Azeem Mehmood An, Xiaoping Jiang, Tao Liu, Wei Qin, Chengfeng Cao, Wu-Chun Tong, Yigang |
author_sort | Mi, Zhiqiang |
collection | PubMed |
description | Human adenovirus type 14 (HAdV-B14) was first reported in 1955 from the Netherlands and since then had been associated with outbreaks of febrile respiratory illness (FRI). In China, sporadic HAdV-B14 infections were first identified in 2010, in Guangzhou and Beijing. In 2012, an outbreak of FRI occurred in Beijing and the etiological agent was determined to be HAdV-B14. We present a complete HAdV-B14 genome sequence isolated from this recent FRI outbreak. Virus in 30 throat swab samples was detected using polymerase chain reaction assays, and confirmed by sequencing of the fiber, hexon and penton genes. Comparative genomics and phylogenetic analysis showed that the newly isolated HAdV-B14 (HAdV-B14 CHN) shared highest sequence homology with a 2006 isolate from the United States and clustered closely with other HAdV-B14 strains. It is expected that data from the present study will help in devising better protocols for virus surveillance, and in developing preventative measures. |
format | Online Article Text |
id | pubmed-7126778 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Elsevier Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-71267782020-04-08 Genomic analysis of HAdV-B14 isolate from the outbreak of febrile respiratory infection in China Mi, Zhiqiang Butt, Azeem Mehmood An, Xiaoping Jiang, Tao Liu, Wei Qin, Chengfeng Cao, Wu-Chun Tong, Yigang Genomics Article Human adenovirus type 14 (HAdV-B14) was first reported in 1955 from the Netherlands and since then had been associated with outbreaks of febrile respiratory illness (FRI). In China, sporadic HAdV-B14 infections were first identified in 2010, in Guangzhou and Beijing. In 2012, an outbreak of FRI occurred in Beijing and the etiological agent was determined to be HAdV-B14. We present a complete HAdV-B14 genome sequence isolated from this recent FRI outbreak. Virus in 30 throat swab samples was detected using polymerase chain reaction assays, and confirmed by sequencing of the fiber, hexon and penton genes. Comparative genomics and phylogenetic analysis showed that the newly isolated HAdV-B14 (HAdV-B14 CHN) shared highest sequence homology with a 2006 isolate from the United States and clustered closely with other HAdV-B14 strains. It is expected that data from the present study will help in devising better protocols for virus surveillance, and in developing preventative measures. Elsevier Inc. 2013 2013-09-20 /pmc/articles/PMC7126778/ /pubmed/24055951 http://dx.doi.org/10.1016/j.ygeno.2013.09.001 Text en Copyright © 2013 Elsevier Inc. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Mi, Zhiqiang Butt, Azeem Mehmood An, Xiaoping Jiang, Tao Liu, Wei Qin, Chengfeng Cao, Wu-Chun Tong, Yigang Genomic analysis of HAdV-B14 isolate from the outbreak of febrile respiratory infection in China |
title | Genomic analysis of HAdV-B14 isolate from the outbreak of febrile respiratory infection in China |
title_full | Genomic analysis of HAdV-B14 isolate from the outbreak of febrile respiratory infection in China |
title_fullStr | Genomic analysis of HAdV-B14 isolate from the outbreak of febrile respiratory infection in China |
title_full_unstemmed | Genomic analysis of HAdV-B14 isolate from the outbreak of febrile respiratory infection in China |
title_short | Genomic analysis of HAdV-B14 isolate from the outbreak of febrile respiratory infection in China |
title_sort | genomic analysis of hadv-b14 isolate from the outbreak of febrile respiratory infection in china |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126778/ https://www.ncbi.nlm.nih.gov/pubmed/24055951 http://dx.doi.org/10.1016/j.ygeno.2013.09.001 |
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