Cargando…

Reverse transcription loop-mediated isothermal amplification for the rapid detection of infectious bronchitis virus in infected chicken tissues

A reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay targeting the nucleocapsid phosphoprotein gene of infectious bronchitis virus (IBV) was developed. The detection limits for the IBV RT-LAMP assay were 10(1) 50% egg infection dose (EID(50)) per 50 μl of titrated viruses a...

Descripción completa

Detalles Bibliográficos
Autores principales: Chen, Hao-tai, Zhang, Jie, Ma, Yan-ping, Ma, Li-na, Ding, Yao-zhong, Liu, Xiang-tao, Cai, Xue-peng, Ma, Li-qing, Zhang, Yong-guang, Liu, Yong-sheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126806/
https://www.ncbi.nlm.nih.gov/pubmed/19835950
http://dx.doi.org/10.1016/j.mcp.2009.10.001
_version_ 1783516223852511232
author Chen, Hao-tai
Zhang, Jie
Ma, Yan-ping
Ma, Li-na
Ding, Yao-zhong
Liu, Xiang-tao
Cai, Xue-peng
Ma, Li-qing
Zhang, Yong-guang
Liu, Yong-sheng
author_facet Chen, Hao-tai
Zhang, Jie
Ma, Yan-ping
Ma, Li-na
Ding, Yao-zhong
Liu, Xiang-tao
Cai, Xue-peng
Ma, Li-qing
Zhang, Yong-guang
Liu, Yong-sheng
author_sort Chen, Hao-tai
collection PubMed
description A reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay targeting the nucleocapsid phosphoprotein gene of infectious bronchitis virus (IBV) was developed. The detection limits for the IBV RT-LAMP assay were 10(1) 50% egg infection dose (EID(50)) per 50 μl of titrated viruses and no cross-reaction of IBV RT-LAMP was found when tested with other viruses including Newcastle disease virus (NDV), avian reovirus (ARV), and infectious laryngotrachietis virus (ILTV) due to their mismatch with IBV RT-LAMP primers. A total of 187 clinical tissues samples (88 blood, 62 kidney and 37 lung) were evaluated and compared to conventional RT-PCR. The sensitivity of RT-LAMP and RT-PCR assays for detecting IBV RNA in clinical specimens was 99.5% and 98.4%, respectively. These findings showed that the RT-LAMP assay has potential usefulness for rapid and sensitive diagnosis in outbreak of IBV.
format Online
Article
Text
id pubmed-7126806
institution National Center for Biotechnology Information
language English
publishDate 2010
publisher Elsevier Ltd.
record_format MEDLINE/PubMed
spelling pubmed-71268062020-04-08 Reverse transcription loop-mediated isothermal amplification for the rapid detection of infectious bronchitis virus in infected chicken tissues Chen, Hao-tai Zhang, Jie Ma, Yan-ping Ma, Li-na Ding, Yao-zhong Liu, Xiang-tao Cai, Xue-peng Ma, Li-qing Zhang, Yong-guang Liu, Yong-sheng Mol Cell Probes Article A reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay targeting the nucleocapsid phosphoprotein gene of infectious bronchitis virus (IBV) was developed. The detection limits for the IBV RT-LAMP assay were 10(1) 50% egg infection dose (EID(50)) per 50 μl of titrated viruses and no cross-reaction of IBV RT-LAMP was found when tested with other viruses including Newcastle disease virus (NDV), avian reovirus (ARV), and infectious laryngotrachietis virus (ILTV) due to their mismatch with IBV RT-LAMP primers. A total of 187 clinical tissues samples (88 blood, 62 kidney and 37 lung) were evaluated and compared to conventional RT-PCR. The sensitivity of RT-LAMP and RT-PCR assays for detecting IBV RNA in clinical specimens was 99.5% and 98.4%, respectively. These findings showed that the RT-LAMP assay has potential usefulness for rapid and sensitive diagnosis in outbreak of IBV. Elsevier Ltd. 2010-04 2009-10-14 /pmc/articles/PMC7126806/ /pubmed/19835950 http://dx.doi.org/10.1016/j.mcp.2009.10.001 Text en Copyright © 2009 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Chen, Hao-tai
Zhang, Jie
Ma, Yan-ping
Ma, Li-na
Ding, Yao-zhong
Liu, Xiang-tao
Cai, Xue-peng
Ma, Li-qing
Zhang, Yong-guang
Liu, Yong-sheng
Reverse transcription loop-mediated isothermal amplification for the rapid detection of infectious bronchitis virus in infected chicken tissues
title Reverse transcription loop-mediated isothermal amplification for the rapid detection of infectious bronchitis virus in infected chicken tissues
title_full Reverse transcription loop-mediated isothermal amplification for the rapid detection of infectious bronchitis virus in infected chicken tissues
title_fullStr Reverse transcription loop-mediated isothermal amplification for the rapid detection of infectious bronchitis virus in infected chicken tissues
title_full_unstemmed Reverse transcription loop-mediated isothermal amplification for the rapid detection of infectious bronchitis virus in infected chicken tissues
title_short Reverse transcription loop-mediated isothermal amplification for the rapid detection of infectious bronchitis virus in infected chicken tissues
title_sort reverse transcription loop-mediated isothermal amplification for the rapid detection of infectious bronchitis virus in infected chicken tissues
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7126806/
https://www.ncbi.nlm.nih.gov/pubmed/19835950
http://dx.doi.org/10.1016/j.mcp.2009.10.001
work_keys_str_mv AT chenhaotai reversetranscriptionloopmediatedisothermalamplificationfortherapiddetectionofinfectiousbronchitisvirusininfectedchickentissues
AT zhangjie reversetranscriptionloopmediatedisothermalamplificationfortherapiddetectionofinfectiousbronchitisvirusininfectedchickentissues
AT mayanping reversetranscriptionloopmediatedisothermalamplificationfortherapiddetectionofinfectiousbronchitisvirusininfectedchickentissues
AT malina reversetranscriptionloopmediatedisothermalamplificationfortherapiddetectionofinfectiousbronchitisvirusininfectedchickentissues
AT dingyaozhong reversetranscriptionloopmediatedisothermalamplificationfortherapiddetectionofinfectiousbronchitisvirusininfectedchickentissues
AT liuxiangtao reversetranscriptionloopmediatedisothermalamplificationfortherapiddetectionofinfectiousbronchitisvirusininfectedchickentissues
AT caixuepeng reversetranscriptionloopmediatedisothermalamplificationfortherapiddetectionofinfectiousbronchitisvirusininfectedchickentissues
AT maliqing reversetranscriptionloopmediatedisothermalamplificationfortherapiddetectionofinfectiousbronchitisvirusininfectedchickentissues
AT zhangyongguang reversetranscriptionloopmediatedisothermalamplificationfortherapiddetectionofinfectiousbronchitisvirusininfectedchickentissues
AT liuyongsheng reversetranscriptionloopmediatedisothermalamplificationfortherapiddetectionofinfectiousbronchitisvirusininfectedchickentissues