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Nucleic acid detection using G-quadruplex amplification methodologies

In the last decade, there has been an explosion in the use of G-quadruplex labels to detect various analytes, including DNA/RNA, proteins, metals and other metabolites. In this review, we focus on strategies for the detection of nucleic acids, using G-quadruplexes as detection labels or as enzyme la...

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Detalles Bibliográficos
Autores principales: Roembke, Benjamin T., Nakayama, Shizuka, Sintim, Herman O.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Inc. 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7129037/
https://www.ncbi.nlm.nih.gov/pubmed/24135042
http://dx.doi.org/10.1016/j.ymeth.2013.10.003
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author Roembke, Benjamin T.
Nakayama, Shizuka
Sintim, Herman O.
author_facet Roembke, Benjamin T.
Nakayama, Shizuka
Sintim, Herman O.
author_sort Roembke, Benjamin T.
collection PubMed
description In the last decade, there has been an explosion in the use of G-quadruplex labels to detect various analytes, including DNA/RNA, proteins, metals and other metabolites. In this review, we focus on strategies for the detection of nucleic acids, using G-quadruplexes as detection labels or as enzyme labels that amplify detection signals. Methods to detect other analytes are briefly mentioned. We highlight various strategies, including split G-quadruplex, hemin–G-quadruplex conjugates, molecular beacon G-quadruplex or inhibited G-quadruplex probes. The tandem use of G-quadruplex labels with various DNA-modifying enzymes, such as polymerases (used for rolling circle amplification), exonucleases and endonucleases, is also discussed. Some of the detection modalities that are discussed in this review include fluorescence, colorimetric, chemiluminescence, and electrochemical methods.
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spelling pubmed-71290372020-04-08 Nucleic acid detection using G-quadruplex amplification methodologies Roembke, Benjamin T. Nakayama, Shizuka Sintim, Herman O. Methods Article In the last decade, there has been an explosion in the use of G-quadruplex labels to detect various analytes, including DNA/RNA, proteins, metals and other metabolites. In this review, we focus on strategies for the detection of nucleic acids, using G-quadruplexes as detection labels or as enzyme labels that amplify detection signals. Methods to detect other analytes are briefly mentioned. We highlight various strategies, including split G-quadruplex, hemin–G-quadruplex conjugates, molecular beacon G-quadruplex or inhibited G-quadruplex probes. The tandem use of G-quadruplex labels with various DNA-modifying enzymes, such as polymerases (used for rolling circle amplification), exonucleases and endonucleases, is also discussed. Some of the detection modalities that are discussed in this review include fluorescence, colorimetric, chemiluminescence, and electrochemical methods. Elsevier Inc. 2013-12-15 2013-10-14 /pmc/articles/PMC7129037/ /pubmed/24135042 http://dx.doi.org/10.1016/j.ymeth.2013.10.003 Text en Copyright © 2013 Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Roembke, Benjamin T.
Nakayama, Shizuka
Sintim, Herman O.
Nucleic acid detection using G-quadruplex amplification methodologies
title Nucleic acid detection using G-quadruplex amplification methodologies
title_full Nucleic acid detection using G-quadruplex amplification methodologies
title_fullStr Nucleic acid detection using G-quadruplex amplification methodologies
title_full_unstemmed Nucleic acid detection using G-quadruplex amplification methodologies
title_short Nucleic acid detection using G-quadruplex amplification methodologies
title_sort nucleic acid detection using g-quadruplex amplification methodologies
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7129037/
https://www.ncbi.nlm.nih.gov/pubmed/24135042
http://dx.doi.org/10.1016/j.ymeth.2013.10.003
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