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Capturing variation in floral shape: a virtual3D based morphospace for Pelargonium
BACKGROUND: Variation in floral shapes has long fascinated biologists and its modelling enables testing of evolutionary hypotheses. Recent comparative studies that explore floral shape have largely ignored 3D floral shape. We propose quantifying floral shape by using geometric morphometrics on a vir...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7130111/ https://www.ncbi.nlm.nih.gov/pubmed/32274266 http://dx.doi.org/10.7717/peerj.8823 |
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author | van de Kerke, Sara J. van Engelenhoven, Tiemen van Es, Anne L. Schat, Laura van Son, Lisa M. Vink, Sverre Hemerik, Lia van Velzen, Robin Schranz, M. Eric Bakker, Freek T. |
author_facet | van de Kerke, Sara J. van Engelenhoven, Tiemen van Es, Anne L. Schat, Laura van Son, Lisa M. Vink, Sverre Hemerik, Lia van Velzen, Robin Schranz, M. Eric Bakker, Freek T. |
author_sort | van de Kerke, Sara J. |
collection | PubMed |
description | BACKGROUND: Variation in floral shapes has long fascinated biologists and its modelling enables testing of evolutionary hypotheses. Recent comparative studies that explore floral shape have largely ignored 3D floral shape. We propose quantifying floral shape by using geometric morphometrics on a virtual3D model reconstructed from 2D photographical data and demonstrate its performance in capturing shape variation. METHODS: This approach offers unique benefits to complement established imaging techniques (i) by enabling adequate coverage of the potential morphospace of large and diverse flowering-plant clades; (ii) by circumventing asynchronicity in anthesis of different floral parts; and (iii) by incorporating variation in copy number of floral organs within structures. We demonstrate our approach by analysing 90 florally-diverse species of the Southern African genus Pelargonium (Geraniaceae). We quantify Pelargonium floral shapes using 117 landmarks and show similarities in reconstructed morphospaces for nectar tube, corolla (2D datasets), and a combined virtual3D dataset. RESULTS: Our results indicate that Pelargonium species differ in floral shape, which can also vary extensively within a species. PCA results of the reconstructed virtual3D floral models are highly congruent with the separate 2D morphospaces, indicating it is an accurate, virtual, representation of floral shape. Through our approach, we find that adding the third dimension to the data is crucial to accurately interpret the manner of, as well as levels of, shape variation in flowers. |
format | Online Article Text |
id | pubmed-7130111 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-71301112020-04-09 Capturing variation in floral shape: a virtual3D based morphospace for Pelargonium van de Kerke, Sara J. van Engelenhoven, Tiemen van Es, Anne L. Schat, Laura van Son, Lisa M. Vink, Sverre Hemerik, Lia van Velzen, Robin Schranz, M. Eric Bakker, Freek T. PeerJ Biodiversity BACKGROUND: Variation in floral shapes has long fascinated biologists and its modelling enables testing of evolutionary hypotheses. Recent comparative studies that explore floral shape have largely ignored 3D floral shape. We propose quantifying floral shape by using geometric morphometrics on a virtual3D model reconstructed from 2D photographical data and demonstrate its performance in capturing shape variation. METHODS: This approach offers unique benefits to complement established imaging techniques (i) by enabling adequate coverage of the potential morphospace of large and diverse flowering-plant clades; (ii) by circumventing asynchronicity in anthesis of different floral parts; and (iii) by incorporating variation in copy number of floral organs within structures. We demonstrate our approach by analysing 90 florally-diverse species of the Southern African genus Pelargonium (Geraniaceae). We quantify Pelargonium floral shapes using 117 landmarks and show similarities in reconstructed morphospaces for nectar tube, corolla (2D datasets), and a combined virtual3D dataset. RESULTS: Our results indicate that Pelargonium species differ in floral shape, which can also vary extensively within a species. PCA results of the reconstructed virtual3D floral models are highly congruent with the separate 2D morphospaces, indicating it is an accurate, virtual, representation of floral shape. Through our approach, we find that adding the third dimension to the data is crucial to accurately interpret the manner of, as well as levels of, shape variation in flowers. PeerJ Inc. 2020-04-02 /pmc/articles/PMC7130111/ /pubmed/32274266 http://dx.doi.org/10.7717/peerj.8823 Text en © 2020 van de Kerke et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Biodiversity van de Kerke, Sara J. van Engelenhoven, Tiemen van Es, Anne L. Schat, Laura van Son, Lisa M. Vink, Sverre Hemerik, Lia van Velzen, Robin Schranz, M. Eric Bakker, Freek T. Capturing variation in floral shape: a virtual3D based morphospace for Pelargonium |
title | Capturing variation in floral shape: a virtual3D based morphospace for Pelargonium |
title_full | Capturing variation in floral shape: a virtual3D based morphospace for Pelargonium |
title_fullStr | Capturing variation in floral shape: a virtual3D based morphospace for Pelargonium |
title_full_unstemmed | Capturing variation in floral shape: a virtual3D based morphospace for Pelargonium |
title_short | Capturing variation in floral shape: a virtual3D based morphospace for Pelargonium |
title_sort | capturing variation in floral shape: a virtual3d based morphospace for pelargonium |
topic | Biodiversity |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7130111/ https://www.ncbi.nlm.nih.gov/pubmed/32274266 http://dx.doi.org/10.7717/peerj.8823 |
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