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Crystal structure, Hirshfeld surface analysis and computational study of 2-chloro-N-[4-(methylsulfanyl)phenyl]acetamide
In the title compound, C(9)H(10)ClNOS, the amide functional group –C(=O)NH– adopts a trans conformation with the four atoms nearly coplanar. This conformation promotes the formation of a C(4) hydrogen-bonded chain propagating along the [010] direction. The central part of the molecule, including th...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7133040/ https://www.ncbi.nlm.nih.gov/pubmed/32280511 http://dx.doi.org/10.1107/S2056989020002960 |
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author | Mongkholkeaw, Sitthichok Songsasen, Apisit Duangthongyou, Tanwawan Chainok, Kittipong Suramitr, Songwut Wattanathana, Worawat Wannalerse, Boontana |
author_facet | Mongkholkeaw, Sitthichok Songsasen, Apisit Duangthongyou, Tanwawan Chainok, Kittipong Suramitr, Songwut Wattanathana, Worawat Wannalerse, Boontana |
author_sort | Mongkholkeaw, Sitthichok |
collection | PubMed |
description | In the title compound, C(9)H(10)ClNOS, the amide functional group –C(=O)NH– adopts a trans conformation with the four atoms nearly coplanar. This conformation promotes the formation of a C(4) hydrogen-bonded chain propagating along the [010] direction. The central part of the molecule, including the six-membered ring, the S and N atoms, is fairly planar (r.m.s. deviation of 0.014). The terminal methyl group and the C(=O)CH(2) group are slightly deviating out-of-plane while the terminal Cl atom is almost in-plane. Hirshfeld surface analysis of the title compound suggests that the most significant contacts in the crystal are H⋯H, H⋯Cl/Cl⋯H, H⋯C/C⋯H, H⋯O/O⋯H and H⋯S/S⋯H. π–π interactions between inversion-related molecules also contribute to the crystal packing. DFT calculations have been performed to optimize the structure of the title compound using the CAM-B3LYP functional and the 6–311 G(d,p) basis set. The theoretical absorption spectrum of the title compound was calculated using the TD–DFT method. The analysis of frontier orbitals revealed that the π–π* electronic transition was the major contributor to the absorption peak in the electronic spectrum. |
format | Online Article Text |
id | pubmed-7133040 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-71330402020-04-10 Crystal structure, Hirshfeld surface analysis and computational study of 2-chloro-N-[4-(methylsulfanyl)phenyl]acetamide Mongkholkeaw, Sitthichok Songsasen, Apisit Duangthongyou, Tanwawan Chainok, Kittipong Suramitr, Songwut Wattanathana, Worawat Wannalerse, Boontana Acta Crystallogr E Crystallogr Commun Research Communications In the title compound, C(9)H(10)ClNOS, the amide functional group –C(=O)NH– adopts a trans conformation with the four atoms nearly coplanar. This conformation promotes the formation of a C(4) hydrogen-bonded chain propagating along the [010] direction. The central part of the molecule, including the six-membered ring, the S and N atoms, is fairly planar (r.m.s. deviation of 0.014). The terminal methyl group and the C(=O)CH(2) group are slightly deviating out-of-plane while the terminal Cl atom is almost in-plane. Hirshfeld surface analysis of the title compound suggests that the most significant contacts in the crystal are H⋯H, H⋯Cl/Cl⋯H, H⋯C/C⋯H, H⋯O/O⋯H and H⋯S/S⋯H. π–π interactions between inversion-related molecules also contribute to the crystal packing. DFT calculations have been performed to optimize the structure of the title compound using the CAM-B3LYP functional and the 6–311 G(d,p) basis set. The theoretical absorption spectrum of the title compound was calculated using the TD–DFT method. The analysis of frontier orbitals revealed that the π–π* electronic transition was the major contributor to the absorption peak in the electronic spectrum. International Union of Crystallography 2020-03-31 /pmc/articles/PMC7133040/ /pubmed/32280511 http://dx.doi.org/10.1107/S2056989020002960 Text en © Mongkholkeaw et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Research Communications Mongkholkeaw, Sitthichok Songsasen, Apisit Duangthongyou, Tanwawan Chainok, Kittipong Suramitr, Songwut Wattanathana, Worawat Wannalerse, Boontana Crystal structure, Hirshfeld surface analysis and computational study of 2-chloro-N-[4-(methylsulfanyl)phenyl]acetamide |
title | Crystal structure, Hirshfeld surface analysis and computational study of 2-chloro-N-[4-(methylsulfanyl)phenyl]acetamide |
title_full | Crystal structure, Hirshfeld surface analysis and computational study of 2-chloro-N-[4-(methylsulfanyl)phenyl]acetamide |
title_fullStr | Crystal structure, Hirshfeld surface analysis and computational study of 2-chloro-N-[4-(methylsulfanyl)phenyl]acetamide |
title_full_unstemmed | Crystal structure, Hirshfeld surface analysis and computational study of 2-chloro-N-[4-(methylsulfanyl)phenyl]acetamide |
title_short | Crystal structure, Hirshfeld surface analysis and computational study of 2-chloro-N-[4-(methylsulfanyl)phenyl]acetamide |
title_sort | crystal structure, hirshfeld surface analysis and computational study of 2-chloro-n-[4-(methylsulfanyl)phenyl]acetamide |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7133040/ https://www.ncbi.nlm.nih.gov/pubmed/32280511 http://dx.doi.org/10.1107/S2056989020002960 |
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