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Mesoscopic population equations for spiking neural networks with synaptic short-term plasticity
Coarse-graining microscopic models of biological neural networks to obtain mesoscopic models of neural activities is an essential step towards multi-scale models of the brain. Here, we extend a recent theory for mesoscopic population dynamics with static synapses to the case of dynamic synapses exhi...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7136387/ https://www.ncbi.nlm.nih.gov/pubmed/32253526 http://dx.doi.org/10.1186/s13408-020-00082-z |
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author | Schmutz, Valentin Gerstner, Wulfram Schwalger, Tilo |
author_facet | Schmutz, Valentin Gerstner, Wulfram Schwalger, Tilo |
author_sort | Schmutz, Valentin |
collection | PubMed |
description | Coarse-graining microscopic models of biological neural networks to obtain mesoscopic models of neural activities is an essential step towards multi-scale models of the brain. Here, we extend a recent theory for mesoscopic population dynamics with static synapses to the case of dynamic synapses exhibiting short-term plasticity (STP). The extended theory offers an approximate mean-field dynamics for the synaptic input currents arising from populations of spiking neurons and synapses undergoing Tsodyks–Markram STP. The approximate mean-field dynamics accounts for both finite number of synapses and correlation between the two synaptic variables of the model (utilization and available resources) and its numerical implementation is simple. Comparisons with Monte Carlo simulations of the microscopic model show that in both feedforward and recurrent networks, the mesoscopic mean-field model accurately reproduces the first- and second-order statistics of the total synaptic input into a postsynaptic neuron and accounts for stochastic switches between Up and Down states and for population spikes. The extended mesoscopic population theory of spiking neural networks with STP may be useful for a systematic reduction of detailed biophysical models of cortical microcircuits to numerically efficient and mathematically tractable mean-field models. |
format | Online Article Text |
id | pubmed-7136387 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-71363872020-04-09 Mesoscopic population equations for spiking neural networks with synaptic short-term plasticity Schmutz, Valentin Gerstner, Wulfram Schwalger, Tilo J Math Neurosci Research Coarse-graining microscopic models of biological neural networks to obtain mesoscopic models of neural activities is an essential step towards multi-scale models of the brain. Here, we extend a recent theory for mesoscopic population dynamics with static synapses to the case of dynamic synapses exhibiting short-term plasticity (STP). The extended theory offers an approximate mean-field dynamics for the synaptic input currents arising from populations of spiking neurons and synapses undergoing Tsodyks–Markram STP. The approximate mean-field dynamics accounts for both finite number of synapses and correlation between the two synaptic variables of the model (utilization and available resources) and its numerical implementation is simple. Comparisons with Monte Carlo simulations of the microscopic model show that in both feedforward and recurrent networks, the mesoscopic mean-field model accurately reproduces the first- and second-order statistics of the total synaptic input into a postsynaptic neuron and accounts for stochastic switches between Up and Down states and for population spikes. The extended mesoscopic population theory of spiking neural networks with STP may be useful for a systematic reduction of detailed biophysical models of cortical microcircuits to numerically efficient and mathematically tractable mean-field models. Springer Berlin Heidelberg 2020-04-06 /pmc/articles/PMC7136387/ /pubmed/32253526 http://dx.doi.org/10.1186/s13408-020-00082-z Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Research Schmutz, Valentin Gerstner, Wulfram Schwalger, Tilo Mesoscopic population equations for spiking neural networks with synaptic short-term plasticity |
title | Mesoscopic population equations for spiking neural networks with synaptic short-term plasticity |
title_full | Mesoscopic population equations for spiking neural networks with synaptic short-term plasticity |
title_fullStr | Mesoscopic population equations for spiking neural networks with synaptic short-term plasticity |
title_full_unstemmed | Mesoscopic population equations for spiking neural networks with synaptic short-term plasticity |
title_short | Mesoscopic population equations for spiking neural networks with synaptic short-term plasticity |
title_sort | mesoscopic population equations for spiking neural networks with synaptic short-term plasticity |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7136387/ https://www.ncbi.nlm.nih.gov/pubmed/32253526 http://dx.doi.org/10.1186/s13408-020-00082-z |
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