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Inhibition of Long-Term Variability in Decoding Forelimb Trajectory Using Evolutionary Neural Networks With Error-Correction Learning

Objective: In brain machine interfaces (BMIs), the functional mapping between neural activities and kinematic parameters varied over time owing to changes in neural recording conditions. The variability in neural recording conditions might result in unstable long-term decoding performance. Relevant...

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Autores principales: Yang, Shih-Hung, Wang, Han-Lin, Lo, Yu-Chun, Lai, Hsin-Yi, Chen, Kuan-Yu, Lan, Yu-Hao, Kao, Ching-Chia, Chou, Chin, Lin, Sheng-Huang, Huang, Jyun-We, Wang, Ching-Fu, Kuo, Chao-Hung, Chen, You-Yin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7136463/
https://www.ncbi.nlm.nih.gov/pubmed/32296323
http://dx.doi.org/10.3389/fncom.2020.00022
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author Yang, Shih-Hung
Wang, Han-Lin
Lo, Yu-Chun
Lai, Hsin-Yi
Chen, Kuan-Yu
Lan, Yu-Hao
Kao, Ching-Chia
Chou, Chin
Lin, Sheng-Huang
Huang, Jyun-We
Wang, Ching-Fu
Kuo, Chao-Hung
Chen, You-Yin
author_facet Yang, Shih-Hung
Wang, Han-Lin
Lo, Yu-Chun
Lai, Hsin-Yi
Chen, Kuan-Yu
Lan, Yu-Hao
Kao, Ching-Chia
Chou, Chin
Lin, Sheng-Huang
Huang, Jyun-We
Wang, Ching-Fu
Kuo, Chao-Hung
Chen, You-Yin
author_sort Yang, Shih-Hung
collection PubMed
description Objective: In brain machine interfaces (BMIs), the functional mapping between neural activities and kinematic parameters varied over time owing to changes in neural recording conditions. The variability in neural recording conditions might result in unstable long-term decoding performance. Relevant studies trained decoders with several days of training data to make them inherently robust to changes in neural recording conditions. However, these decoders might not be robust to changes in neural recording conditions when only a few days of training data are available. In time-series prediction and feedback control system, an error feedback was commonly adopted to reduce the effects of model uncertainty. This motivated us to introduce an error feedback to a neural decoder for dealing with the variability in neural recording conditions. Approach: We proposed an evolutionary constructive and pruning neural network with error feedback (ECPNN-EF) as a neural decoder. The ECPNN-EF with partially connected topology decoded the instantaneous firing rates of each sorted unit into forelimb movement of a rat. Furthermore, an error feedback was adopted as an additional input to provide kinematic information and thus compensate for changes in functional mapping. The proposed neural decoder was trained on data collected from a water reward-related lever-pressing task for a rat. The first 2 days of data were used to train the decoder, and the subsequent 10 days of data were used to test the decoder. Main Results: The ECPNN-EF under different settings was evaluated to better understand the impact of the error feedback and partially connected topology. The experimental results demonstrated that the ECPNN-EF achieved significantly higher daily decoding performance with smaller daily variability when using the error feedback and partially connected topology. Significance: These results suggested that the ECPNN-EF with partially connected topology could cope with both within- and across-day changes in neural recording conditions. The error feedback in the ECPNN-EF compensated for decreases in decoding performance when neural recording conditions changed. This mechanism made the ECPNN-EF robust against changes in functional mappings and thus improved the long-term decoding stability when only a few days of training data were available.
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spelling pubmed-71364632020-04-15 Inhibition of Long-Term Variability in Decoding Forelimb Trajectory Using Evolutionary Neural Networks With Error-Correction Learning Yang, Shih-Hung Wang, Han-Lin Lo, Yu-Chun Lai, Hsin-Yi Chen, Kuan-Yu Lan, Yu-Hao Kao, Ching-Chia Chou, Chin Lin, Sheng-Huang Huang, Jyun-We Wang, Ching-Fu Kuo, Chao-Hung Chen, You-Yin Front Comput Neurosci Neuroscience Objective: In brain machine interfaces (BMIs), the functional mapping between neural activities and kinematic parameters varied over time owing to changes in neural recording conditions. The variability in neural recording conditions might result in unstable long-term decoding performance. Relevant studies trained decoders with several days of training data to make them inherently robust to changes in neural recording conditions. However, these decoders might not be robust to changes in neural recording conditions when only a few days of training data are available. In time-series prediction and feedback control system, an error feedback was commonly adopted to reduce the effects of model uncertainty. This motivated us to introduce an error feedback to a neural decoder for dealing with the variability in neural recording conditions. Approach: We proposed an evolutionary constructive and pruning neural network with error feedback (ECPNN-EF) as a neural decoder. The ECPNN-EF with partially connected topology decoded the instantaneous firing rates of each sorted unit into forelimb movement of a rat. Furthermore, an error feedback was adopted as an additional input to provide kinematic information and thus compensate for changes in functional mapping. The proposed neural decoder was trained on data collected from a water reward-related lever-pressing task for a rat. The first 2 days of data were used to train the decoder, and the subsequent 10 days of data were used to test the decoder. Main Results: The ECPNN-EF under different settings was evaluated to better understand the impact of the error feedback and partially connected topology. The experimental results demonstrated that the ECPNN-EF achieved significantly higher daily decoding performance with smaller daily variability when using the error feedback and partially connected topology. Significance: These results suggested that the ECPNN-EF with partially connected topology could cope with both within- and across-day changes in neural recording conditions. The error feedback in the ECPNN-EF compensated for decreases in decoding performance when neural recording conditions changed. This mechanism made the ECPNN-EF robust against changes in functional mappings and thus improved the long-term decoding stability when only a few days of training data were available. Frontiers Media S.A. 2020-03-31 /pmc/articles/PMC7136463/ /pubmed/32296323 http://dx.doi.org/10.3389/fncom.2020.00022 Text en Copyright © 2020 Yang, Wang, Lo, Lai, Chen, Lan, Kao, Chou, Lin, Huang, Wang, Kuo and Chen. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Yang, Shih-Hung
Wang, Han-Lin
Lo, Yu-Chun
Lai, Hsin-Yi
Chen, Kuan-Yu
Lan, Yu-Hao
Kao, Ching-Chia
Chou, Chin
Lin, Sheng-Huang
Huang, Jyun-We
Wang, Ching-Fu
Kuo, Chao-Hung
Chen, You-Yin
Inhibition of Long-Term Variability in Decoding Forelimb Trajectory Using Evolutionary Neural Networks With Error-Correction Learning
title Inhibition of Long-Term Variability in Decoding Forelimb Trajectory Using Evolutionary Neural Networks With Error-Correction Learning
title_full Inhibition of Long-Term Variability in Decoding Forelimb Trajectory Using Evolutionary Neural Networks With Error-Correction Learning
title_fullStr Inhibition of Long-Term Variability in Decoding Forelimb Trajectory Using Evolutionary Neural Networks With Error-Correction Learning
title_full_unstemmed Inhibition of Long-Term Variability in Decoding Forelimb Trajectory Using Evolutionary Neural Networks With Error-Correction Learning
title_short Inhibition of Long-Term Variability in Decoding Forelimb Trajectory Using Evolutionary Neural Networks With Error-Correction Learning
title_sort inhibition of long-term variability in decoding forelimb trajectory using evolutionary neural networks with error-correction learning
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7136463/
https://www.ncbi.nlm.nih.gov/pubmed/32296323
http://dx.doi.org/10.3389/fncom.2020.00022
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