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Predicting the Risk of Melanoma Metastasis Using an Immune Risk Score in the Melanoma Cohort

Melanoma is a highly aggressive cancer, attracting increasing attention worldwide. The 5-year survival rate of patients with metastatic melanoma is low. Therefore, it is critical to identify potential effective biomarkers for diagnosis of melanoma metastasis. In the present study, the melanoma cohor...

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Autores principales: Sheng, Yang, Yanping, Cheng, Tong, Liu, Ning, Liu, Yufeng, Liu, Geyu, Liang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7136491/
https://www.ncbi.nlm.nih.gov/pubmed/32296685
http://dx.doi.org/10.3389/fbioe.2020.00206
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author Sheng, Yang
Yanping, Cheng
Tong, Liu
Ning, Liu
Yufeng, Liu
Geyu, Liang
author_facet Sheng, Yang
Yanping, Cheng
Tong, Liu
Ning, Liu
Yufeng, Liu
Geyu, Liang
author_sort Sheng, Yang
collection PubMed
description Melanoma is a highly aggressive cancer, attracting increasing attention worldwide. The 5-year survival rate of patients with metastatic melanoma is low. Therefore, it is critical to identify potential effective biomarkers for diagnosis of melanoma metastasis. In the present study, the melanoma cohort and immune genes were obtained from the Cancer Genome Atlas (TCGA) database and the ImmPort database, respectively. Then, we constructed the immune risk score (IRS) using univariate and multivariate logistic analysis. The area under the curve (AUC) of IRS in sequencing samples and the initial diagnosis patients was 0.90 and 0.80, respectively. Besides, IRS could add benefits for metastasis diagnosis. For sequencing samples, IRS (OR = 16.35, 95% CI = 8.74–30.59) increased the odds for melanoma metastasis. Similar results were obtained in the initial diagnosis patients (OR = 8.93, 95% CI = 3.53–22.61). A composite nomogram was built based on IRS and clinical information with well-fitted calibration curves. We further used other independent melanoma cohorts from Gene Expression Omnibus (GEO) databases to confirm the reliability and validity of the IRS (AUC > 0.75, OR > 1.04, and P value < 0.01 in all cohorts). In conclusion, IRS is significantly associated with melanoma metastasis and can be a novel effective signature for predicting the metastasis risk.
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spelling pubmed-71364912020-04-15 Predicting the Risk of Melanoma Metastasis Using an Immune Risk Score in the Melanoma Cohort Sheng, Yang Yanping, Cheng Tong, Liu Ning, Liu Yufeng, Liu Geyu, Liang Front Bioeng Biotechnol Bioengineering and Biotechnology Melanoma is a highly aggressive cancer, attracting increasing attention worldwide. The 5-year survival rate of patients with metastatic melanoma is low. Therefore, it is critical to identify potential effective biomarkers for diagnosis of melanoma metastasis. In the present study, the melanoma cohort and immune genes were obtained from the Cancer Genome Atlas (TCGA) database and the ImmPort database, respectively. Then, we constructed the immune risk score (IRS) using univariate and multivariate logistic analysis. The area under the curve (AUC) of IRS in sequencing samples and the initial diagnosis patients was 0.90 and 0.80, respectively. Besides, IRS could add benefits for metastasis diagnosis. For sequencing samples, IRS (OR = 16.35, 95% CI = 8.74–30.59) increased the odds for melanoma metastasis. Similar results were obtained in the initial diagnosis patients (OR = 8.93, 95% CI = 3.53–22.61). A composite nomogram was built based on IRS and clinical information with well-fitted calibration curves. We further used other independent melanoma cohorts from Gene Expression Omnibus (GEO) databases to confirm the reliability and validity of the IRS (AUC > 0.75, OR > 1.04, and P value < 0.01 in all cohorts). In conclusion, IRS is significantly associated with melanoma metastasis and can be a novel effective signature for predicting the metastasis risk. Frontiers Media S.A. 2020-03-31 /pmc/articles/PMC7136491/ /pubmed/32296685 http://dx.doi.org/10.3389/fbioe.2020.00206 Text en Copyright © 2020 Sheng, Yanping, Tong, Ning, Yufeng and Geyu. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Bioengineering and Biotechnology
Sheng, Yang
Yanping, Cheng
Tong, Liu
Ning, Liu
Yufeng, Liu
Geyu, Liang
Predicting the Risk of Melanoma Metastasis Using an Immune Risk Score in the Melanoma Cohort
title Predicting the Risk of Melanoma Metastasis Using an Immune Risk Score in the Melanoma Cohort
title_full Predicting the Risk of Melanoma Metastasis Using an Immune Risk Score in the Melanoma Cohort
title_fullStr Predicting the Risk of Melanoma Metastasis Using an Immune Risk Score in the Melanoma Cohort
title_full_unstemmed Predicting the Risk of Melanoma Metastasis Using an Immune Risk Score in the Melanoma Cohort
title_short Predicting the Risk of Melanoma Metastasis Using an Immune Risk Score in the Melanoma Cohort
title_sort predicting the risk of melanoma metastasis using an immune risk score in the melanoma cohort
topic Bioengineering and Biotechnology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7136491/
https://www.ncbi.nlm.nih.gov/pubmed/32296685
http://dx.doi.org/10.3389/fbioe.2020.00206
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