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Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation
DNA can be preserved in marine and freshwater sediments both in bulk sediment and in intact, viable resting stages. Here, we assess the potential for combined use of ancient, environmental, DNA and timeseries of resurrected long-term dormant organisms, to reconstruct trophic interactions and evoluti...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7138834/ https://www.ncbi.nlm.nih.gov/pubmed/32265485 http://dx.doi.org/10.1038/s42003-020-0899-z |
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author | Ellegaard, Marianne Clokie, Martha R. J. Czypionka, Till Frisch, Dagmar Godhe, Anna Kremp, Anke Letarov, Andrey McGenity, Terry J. Ribeiro, Sofia John Anderson, N. |
author_facet | Ellegaard, Marianne Clokie, Martha R. J. Czypionka, Till Frisch, Dagmar Godhe, Anna Kremp, Anke Letarov, Andrey McGenity, Terry J. Ribeiro, Sofia John Anderson, N. |
author_sort | Ellegaard, Marianne |
collection | PubMed |
description | DNA can be preserved in marine and freshwater sediments both in bulk sediment and in intact, viable resting stages. Here, we assess the potential for combined use of ancient, environmental, DNA and timeseries of resurrected long-term dormant organisms, to reconstruct trophic interactions and evolutionary adaptation to changing environments. These new methods, coupled with independent evidence of biotic and abiotic forcing factors, can provide a holistic view of past ecosystems beyond that offered by standard palaeoecology, help us assess implications of ecological and molecular change for contemporary ecosystem functioning and services, and improve our ability to predict adaptation to environmental stress. |
format | Online Article Text |
id | pubmed-7138834 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-71388342020-04-13 Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation Ellegaard, Marianne Clokie, Martha R. J. Czypionka, Till Frisch, Dagmar Godhe, Anna Kremp, Anke Letarov, Andrey McGenity, Terry J. Ribeiro, Sofia John Anderson, N. Commun Biol Review Article DNA can be preserved in marine and freshwater sediments both in bulk sediment and in intact, viable resting stages. Here, we assess the potential for combined use of ancient, environmental, DNA and timeseries of resurrected long-term dormant organisms, to reconstruct trophic interactions and evolutionary adaptation to changing environments. These new methods, coupled with independent evidence of biotic and abiotic forcing factors, can provide a holistic view of past ecosystems beyond that offered by standard palaeoecology, help us assess implications of ecological and molecular change for contemporary ecosystem functioning and services, and improve our ability to predict adaptation to environmental stress. Nature Publishing Group UK 2020-04-07 /pmc/articles/PMC7138834/ /pubmed/32265485 http://dx.doi.org/10.1038/s42003-020-0899-z Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Review Article Ellegaard, Marianne Clokie, Martha R. J. Czypionka, Till Frisch, Dagmar Godhe, Anna Kremp, Anke Letarov, Andrey McGenity, Terry J. Ribeiro, Sofia John Anderson, N. Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation |
title | Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation |
title_full | Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation |
title_fullStr | Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation |
title_full_unstemmed | Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation |
title_short | Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation |
title_sort | dead or alive: sediment dna archives as tools for tracking aquatic evolution and adaptation |
topic | Review Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7138834/ https://www.ncbi.nlm.nih.gov/pubmed/32265485 http://dx.doi.org/10.1038/s42003-020-0899-z |
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