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Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation

DNA can be preserved in marine and freshwater sediments both in bulk sediment and in intact, viable resting stages. Here, we assess the potential for combined use of ancient, environmental, DNA and timeseries of resurrected long-term dormant organisms, to reconstruct trophic interactions and evoluti...

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Autores principales: Ellegaard, Marianne, Clokie, Martha R. J., Czypionka, Till, Frisch, Dagmar, Godhe, Anna, Kremp, Anke, Letarov, Andrey, McGenity, Terry J., Ribeiro, Sofia, John Anderson, N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7138834/
https://www.ncbi.nlm.nih.gov/pubmed/32265485
http://dx.doi.org/10.1038/s42003-020-0899-z
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author Ellegaard, Marianne
Clokie, Martha R. J.
Czypionka, Till
Frisch, Dagmar
Godhe, Anna
Kremp, Anke
Letarov, Andrey
McGenity, Terry J.
Ribeiro, Sofia
John Anderson, N.
author_facet Ellegaard, Marianne
Clokie, Martha R. J.
Czypionka, Till
Frisch, Dagmar
Godhe, Anna
Kremp, Anke
Letarov, Andrey
McGenity, Terry J.
Ribeiro, Sofia
John Anderson, N.
author_sort Ellegaard, Marianne
collection PubMed
description DNA can be preserved in marine and freshwater sediments both in bulk sediment and in intact, viable resting stages. Here, we assess the potential for combined use of ancient, environmental, DNA and timeseries of resurrected long-term dormant organisms, to reconstruct trophic interactions and evolutionary adaptation to changing environments. These new methods, coupled with independent evidence of biotic and abiotic forcing factors, can provide a holistic view of past ecosystems beyond that offered by standard palaeoecology, help us assess implications of ecological and molecular change for contemporary ecosystem functioning and services, and improve our ability to predict adaptation to environmental stress.
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spelling pubmed-71388342020-04-13 Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation Ellegaard, Marianne Clokie, Martha R. J. Czypionka, Till Frisch, Dagmar Godhe, Anna Kremp, Anke Letarov, Andrey McGenity, Terry J. Ribeiro, Sofia John Anderson, N. Commun Biol Review Article DNA can be preserved in marine and freshwater sediments both in bulk sediment and in intact, viable resting stages. Here, we assess the potential for combined use of ancient, environmental, DNA and timeseries of resurrected long-term dormant organisms, to reconstruct trophic interactions and evolutionary adaptation to changing environments. These new methods, coupled with independent evidence of biotic and abiotic forcing factors, can provide a holistic view of past ecosystems beyond that offered by standard palaeoecology, help us assess implications of ecological and molecular change for contemporary ecosystem functioning and services, and improve our ability to predict adaptation to environmental stress. Nature Publishing Group UK 2020-04-07 /pmc/articles/PMC7138834/ /pubmed/32265485 http://dx.doi.org/10.1038/s42003-020-0899-z Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Review Article
Ellegaard, Marianne
Clokie, Martha R. J.
Czypionka, Till
Frisch, Dagmar
Godhe, Anna
Kremp, Anke
Letarov, Andrey
McGenity, Terry J.
Ribeiro, Sofia
John Anderson, N.
Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation
title Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation
title_full Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation
title_fullStr Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation
title_full_unstemmed Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation
title_short Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation
title_sort dead or alive: sediment dna archives as tools for tracking aquatic evolution and adaptation
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7138834/
https://www.ncbi.nlm.nih.gov/pubmed/32265485
http://dx.doi.org/10.1038/s42003-020-0899-z
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