Cargando…
Machine learning classification of ADHD and HC by multimodal serotonergic data
Serotonin neurotransmission may impact the etiology and pathology of attention-deficit and hyperactivity disorder (ADHD), partly mediated through single nucleotide polymorphisms (SNPs). We propose a multivariate, genetic and positron emission tomography (PET) imaging classification model for ADHD an...
Autores principales: | , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7138849/ https://www.ncbi.nlm.nih.gov/pubmed/32265436 http://dx.doi.org/10.1038/s41398-020-0781-2 |
_version_ | 1783518638667464704 |
---|---|
author | Kautzky, A. Vanicek, T. Philippe, C. Kranz, G. S. Wadsak, W. Mitterhauser, M. Hartmann, A. Hahn, A. Hacker, M. Rujescu, D. Kasper, S. Lanzenberger, R. |
author_facet | Kautzky, A. Vanicek, T. Philippe, C. Kranz, G. S. Wadsak, W. Mitterhauser, M. Hartmann, A. Hahn, A. Hacker, M. Rujescu, D. Kasper, S. Lanzenberger, R. |
author_sort | Kautzky, A. |
collection | PubMed |
description | Serotonin neurotransmission may impact the etiology and pathology of attention-deficit and hyperactivity disorder (ADHD), partly mediated through single nucleotide polymorphisms (SNPs). We propose a multivariate, genetic and positron emission tomography (PET) imaging classification model for ADHD and healthy controls (HC). Sixteen patients with ADHD and 22 HC were scanned by PET to measure serotonin transporter (SERT‘) binding potential with [(11)C]DASB. All subjects were genotyped for thirty SNPs within the HTR1A, HTR1B, HTR2A and TPH2 genes. Cortical and subcortical regions of interest (ROI) were defined and random forest (RF) machine learning was used for feature selection and classification in a five-fold cross-validation model with ten repeats. Variable selection highlighted the ROI posterior cingulate gyrus, cuneus, precuneus, pre-, para- and postcentral gyri as well as the SNPs HTR2A rs1328684 and rs6311 and HTR1B rs130058 as most discriminative between ADHD and HC status. The mean accuracy for the validation sets across repeats was 0.82 (±0.09) with balanced sensitivity and specificity of 0.75 and 0.86, respectively. With a prediction accuracy above 0.8, the findings underlying the proposed model advocate the relevance of the SERT as well as the HTR1B and HTR2A genes in ADHD and hint towards disease-specific effects. Regarding the high rates of comorbidities and difficult differential diagnosis especially for ADHD, a reliable computer-aided diagnostic tool for disorders anchored in the serotonergic system will support clinical decisions. |
format | Online Article Text |
id | pubmed-7138849 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-71388492020-04-13 Machine learning classification of ADHD and HC by multimodal serotonergic data Kautzky, A. Vanicek, T. Philippe, C. Kranz, G. S. Wadsak, W. Mitterhauser, M. Hartmann, A. Hahn, A. Hacker, M. Rujescu, D. Kasper, S. Lanzenberger, R. Transl Psychiatry Article Serotonin neurotransmission may impact the etiology and pathology of attention-deficit and hyperactivity disorder (ADHD), partly mediated through single nucleotide polymorphisms (SNPs). We propose a multivariate, genetic and positron emission tomography (PET) imaging classification model for ADHD and healthy controls (HC). Sixteen patients with ADHD and 22 HC were scanned by PET to measure serotonin transporter (SERT‘) binding potential with [(11)C]DASB. All subjects were genotyped for thirty SNPs within the HTR1A, HTR1B, HTR2A and TPH2 genes. Cortical and subcortical regions of interest (ROI) were defined and random forest (RF) machine learning was used for feature selection and classification in a five-fold cross-validation model with ten repeats. Variable selection highlighted the ROI posterior cingulate gyrus, cuneus, precuneus, pre-, para- and postcentral gyri as well as the SNPs HTR2A rs1328684 and rs6311 and HTR1B rs130058 as most discriminative between ADHD and HC status. The mean accuracy for the validation sets across repeats was 0.82 (±0.09) with balanced sensitivity and specificity of 0.75 and 0.86, respectively. With a prediction accuracy above 0.8, the findings underlying the proposed model advocate the relevance of the SERT as well as the HTR1B and HTR2A genes in ADHD and hint towards disease-specific effects. Regarding the high rates of comorbidities and difficult differential diagnosis especially for ADHD, a reliable computer-aided diagnostic tool for disorders anchored in the serotonergic system will support clinical decisions. Nature Publishing Group UK 2020-04-07 /pmc/articles/PMC7138849/ /pubmed/32265436 http://dx.doi.org/10.1038/s41398-020-0781-2 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Kautzky, A. Vanicek, T. Philippe, C. Kranz, G. S. Wadsak, W. Mitterhauser, M. Hartmann, A. Hahn, A. Hacker, M. Rujescu, D. Kasper, S. Lanzenberger, R. Machine learning classification of ADHD and HC by multimodal serotonergic data |
title | Machine learning classification of ADHD and HC by multimodal serotonergic data |
title_full | Machine learning classification of ADHD and HC by multimodal serotonergic data |
title_fullStr | Machine learning classification of ADHD and HC by multimodal serotonergic data |
title_full_unstemmed | Machine learning classification of ADHD and HC by multimodal serotonergic data |
title_short | Machine learning classification of ADHD and HC by multimodal serotonergic data |
title_sort | machine learning classification of adhd and hc by multimodal serotonergic data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7138849/ https://www.ncbi.nlm.nih.gov/pubmed/32265436 http://dx.doi.org/10.1038/s41398-020-0781-2 |
work_keys_str_mv | AT kautzkya machinelearningclassificationofadhdandhcbymultimodalserotonergicdata AT vanicekt machinelearningclassificationofadhdandhcbymultimodalserotonergicdata AT philippec machinelearningclassificationofadhdandhcbymultimodalserotonergicdata AT kranzgs machinelearningclassificationofadhdandhcbymultimodalserotonergicdata AT wadsakw machinelearningclassificationofadhdandhcbymultimodalserotonergicdata AT mitterhauserm machinelearningclassificationofadhdandhcbymultimodalserotonergicdata AT hartmanna machinelearningclassificationofadhdandhcbymultimodalserotonergicdata AT hahna machinelearningclassificationofadhdandhcbymultimodalserotonergicdata AT hackerm machinelearningclassificationofadhdandhcbymultimodalserotonergicdata AT rujescud machinelearningclassificationofadhdandhcbymultimodalserotonergicdata AT kaspers machinelearningclassificationofadhdandhcbymultimodalserotonergicdata AT lanzenbergerr machinelearningclassificationofadhdandhcbymultimodalserotonergicdata |