The SCOP database in 2020: expanded classification of representative family and superfamily domains of known protein structures

The Structural Classification of Proteins (SCOP) database is a classification of protein domains organised according to their evolutionary and structural relationships. We report a major effort to increase the coverage of structural data, aiming to provide classification of almost all domain superfa...

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Detalles Bibliográficos
Autores principales: Andreeva, Antonina, Kulesha, Eugene, Gough, Julian, Murzin, Alexey G
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
NAR Breakthrough Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7139981/
https://www.ncbi.nlm.nih.gov/pubmed/31724711
http://dx.doi.org/10.1093/nar/gkz1064
Descripción
Sumario:The Structural Classification of Proteins (SCOP) database is a classification of protein domains organised according to their evolutionary and structural relationships. We report a major effort to increase the coverage of structural data, aiming to provide classification of almost all domain superfamilies with representatives in the PDB. We have also improved the database schema, provided a new API and modernised the web interface. This is by far the most significant update in coverage since SCOP 1.75 and builds on the advances in schema from the SCOP 2 prototype. The database is accessible from http://scop.mrc-lmb.cam.ac.uk.

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