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Population Genetic Structure Is Unrelated to Shell Shape, Thickness and Organic Content in European Populations of the Soft-Shell Clam Mya Arenaria

The soft-shell clam Mya arenaria is one of the most ancient invaders of European coasts and is present in many coastal ecosystems, yet little is known about its genetic structure in Europe. We collected 266 samples spanning a latitudinal cline from the Mediterranean to the North Sea and genotyped th...

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Autores principales: De Noia, Michele, Telesca, Luca, Vendrami, David L. J., Gokalp, Hatice K., Charrier, Grégory, Harper, Elizabeth M., Hoffman, Joseph I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7140805/
https://www.ncbi.nlm.nih.gov/pubmed/32168796
http://dx.doi.org/10.3390/genes11030298
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author De Noia, Michele
Telesca, Luca
Vendrami, David L. J.
Gokalp, Hatice K.
Charrier, Grégory
Harper, Elizabeth M.
Hoffman, Joseph I.
author_facet De Noia, Michele
Telesca, Luca
Vendrami, David L. J.
Gokalp, Hatice K.
Charrier, Grégory
Harper, Elizabeth M.
Hoffman, Joseph I.
author_sort De Noia, Michele
collection PubMed
description The soft-shell clam Mya arenaria is one of the most ancient invaders of European coasts and is present in many coastal ecosystems, yet little is known about its genetic structure in Europe. We collected 266 samples spanning a latitudinal cline from the Mediterranean to the North Sea and genotyped them at 12 microsatellite loci. In parallel, geometric morphometric analysis of shell outlines was used to test for associations between shell shape, latitude and genotype, and for a selection of shells we measured the thickness and organic content of the granular prismatic (PR), the crossed-lamellar (CL) and the complex crossed-lamellar (CCL) layers. Strong population structure was detected, with Bayesian cluster analysis identifying four groups located in the Mediterranean, Celtic Sea, along the continental coast of the North Sea and in Scotland. Multivariate analysis of shell shape uncovered a significant effect of collection site but no associations with any other variables. Shell thickness did not vary significantly with either latitude or genotype, although PR thickness and calcification were positively associated with latitude, while CCL thickness showed a negative association. Our study provides new insights into the population structure of this species and sheds light on factors influencing shell shape, thickness and microstructure.
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spelling pubmed-71408052020-04-10 Population Genetic Structure Is Unrelated to Shell Shape, Thickness and Organic Content in European Populations of the Soft-Shell Clam Mya Arenaria De Noia, Michele Telesca, Luca Vendrami, David L. J. Gokalp, Hatice K. Charrier, Grégory Harper, Elizabeth M. Hoffman, Joseph I. Genes (Basel) Article The soft-shell clam Mya arenaria is one of the most ancient invaders of European coasts and is present in many coastal ecosystems, yet little is known about its genetic structure in Europe. We collected 266 samples spanning a latitudinal cline from the Mediterranean to the North Sea and genotyped them at 12 microsatellite loci. In parallel, geometric morphometric analysis of shell outlines was used to test for associations between shell shape, latitude and genotype, and for a selection of shells we measured the thickness and organic content of the granular prismatic (PR), the crossed-lamellar (CL) and the complex crossed-lamellar (CCL) layers. Strong population structure was detected, with Bayesian cluster analysis identifying four groups located in the Mediterranean, Celtic Sea, along the continental coast of the North Sea and in Scotland. Multivariate analysis of shell shape uncovered a significant effect of collection site but no associations with any other variables. Shell thickness did not vary significantly with either latitude or genotype, although PR thickness and calcification were positively associated with latitude, while CCL thickness showed a negative association. Our study provides new insights into the population structure of this species and sheds light on factors influencing shell shape, thickness and microstructure. MDPI 2020-03-11 /pmc/articles/PMC7140805/ /pubmed/32168796 http://dx.doi.org/10.3390/genes11030298 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
De Noia, Michele
Telesca, Luca
Vendrami, David L. J.
Gokalp, Hatice K.
Charrier, Grégory
Harper, Elizabeth M.
Hoffman, Joseph I.
Population Genetic Structure Is Unrelated to Shell Shape, Thickness and Organic Content in European Populations of the Soft-Shell Clam Mya Arenaria
title Population Genetic Structure Is Unrelated to Shell Shape, Thickness and Organic Content in European Populations of the Soft-Shell Clam Mya Arenaria
title_full Population Genetic Structure Is Unrelated to Shell Shape, Thickness and Organic Content in European Populations of the Soft-Shell Clam Mya Arenaria
title_fullStr Population Genetic Structure Is Unrelated to Shell Shape, Thickness and Organic Content in European Populations of the Soft-Shell Clam Mya Arenaria
title_full_unstemmed Population Genetic Structure Is Unrelated to Shell Shape, Thickness and Organic Content in European Populations of the Soft-Shell Clam Mya Arenaria
title_short Population Genetic Structure Is Unrelated to Shell Shape, Thickness and Organic Content in European Populations of the Soft-Shell Clam Mya Arenaria
title_sort population genetic structure is unrelated to shell shape, thickness and organic content in european populations of the soft-shell clam mya arenaria
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7140805/
https://www.ncbi.nlm.nih.gov/pubmed/32168796
http://dx.doi.org/10.3390/genes11030298
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