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A model of tuberculosis clustering in low incidence countries reveals more transmission in the United Kingdom than the Netherlands between 2010 and 2015
Tuberculosis (TB) remains a public health threat in low TB incidence countries, through a combination of reactivated disease and onward transmission. Using surveillance data from the United Kingdom (UK) and the Netherlands (NL), we demonstrate a simple and predictable relationship between the probab...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7141699/ https://www.ncbi.nlm.nih.gov/pubmed/32218567 http://dx.doi.org/10.1371/journal.pcbi.1007687 |
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author | Brooks-Pollock, Ellen Danon, Leon Korthals Altes, Hester Davidson, Jennifer A. Pollock, Andrew M. T. van Soolingen, Dick Campbell, Colin Lalor, Maeve K. |
author_facet | Brooks-Pollock, Ellen Danon, Leon Korthals Altes, Hester Davidson, Jennifer A. Pollock, Andrew M. T. van Soolingen, Dick Campbell, Colin Lalor, Maeve K. |
author_sort | Brooks-Pollock, Ellen |
collection | PubMed |
description | Tuberculosis (TB) remains a public health threat in low TB incidence countries, through a combination of reactivated disease and onward transmission. Using surveillance data from the United Kingdom (UK) and the Netherlands (NL), we demonstrate a simple and predictable relationship between the probability of observing a cluster and its size (the number of cases with a single genotype). We demonstrate that the full range of observed cluster sizes can be described using a modified branching process model with the individual reproduction number following a Poisson lognormal distribution. We estimate that, on average, between 2010 and 2015, a TB case generated 0.41 (95% CrI 0.30,0.60) secondary cases in the UK, and 0.24 (0.14,0.48) secondary cases in the NL. A majority of cases did not generate any secondary cases. Recent transmission accounted for 39% (26%,60%) of UK cases and 23%(13%,37%) of NL cases. We predict that reducing UK transmission rates to those observed in the NL would result in 538(266,818) fewer cases annually in the UK. In conclusion, while TB in low incidence countries is strongly associated with reactivated infections, we demonstrate that recent transmission remains sufficient to warrant policies aimed at limiting local TB spread. |
format | Online Article Text |
id | pubmed-7141699 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-71416992020-04-16 A model of tuberculosis clustering in low incidence countries reveals more transmission in the United Kingdom than the Netherlands between 2010 and 2015 Brooks-Pollock, Ellen Danon, Leon Korthals Altes, Hester Davidson, Jennifer A. Pollock, Andrew M. T. van Soolingen, Dick Campbell, Colin Lalor, Maeve K. PLoS Comput Biol Research Article Tuberculosis (TB) remains a public health threat in low TB incidence countries, through a combination of reactivated disease and onward transmission. Using surveillance data from the United Kingdom (UK) and the Netherlands (NL), we demonstrate a simple and predictable relationship between the probability of observing a cluster and its size (the number of cases with a single genotype). We demonstrate that the full range of observed cluster sizes can be described using a modified branching process model with the individual reproduction number following a Poisson lognormal distribution. We estimate that, on average, between 2010 and 2015, a TB case generated 0.41 (95% CrI 0.30,0.60) secondary cases in the UK, and 0.24 (0.14,0.48) secondary cases in the NL. A majority of cases did not generate any secondary cases. Recent transmission accounted for 39% (26%,60%) of UK cases and 23%(13%,37%) of NL cases. We predict that reducing UK transmission rates to those observed in the NL would result in 538(266,818) fewer cases annually in the UK. In conclusion, while TB in low incidence countries is strongly associated with reactivated infections, we demonstrate that recent transmission remains sufficient to warrant policies aimed at limiting local TB spread. Public Library of Science 2020-03-27 /pmc/articles/PMC7141699/ /pubmed/32218567 http://dx.doi.org/10.1371/journal.pcbi.1007687 Text en © 2020 Brooks-Pollock et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Brooks-Pollock, Ellen Danon, Leon Korthals Altes, Hester Davidson, Jennifer A. Pollock, Andrew M. T. van Soolingen, Dick Campbell, Colin Lalor, Maeve K. A model of tuberculosis clustering in low incidence countries reveals more transmission in the United Kingdom than the Netherlands between 2010 and 2015 |
title | A model of tuberculosis clustering in low incidence countries reveals more transmission in the United Kingdom than the Netherlands between 2010 and 2015 |
title_full | A model of tuberculosis clustering in low incidence countries reveals more transmission in the United Kingdom than the Netherlands between 2010 and 2015 |
title_fullStr | A model of tuberculosis clustering in low incidence countries reveals more transmission in the United Kingdom than the Netherlands between 2010 and 2015 |
title_full_unstemmed | A model of tuberculosis clustering in low incidence countries reveals more transmission in the United Kingdom than the Netherlands between 2010 and 2015 |
title_short | A model of tuberculosis clustering in low incidence countries reveals more transmission in the United Kingdom than the Netherlands between 2010 and 2015 |
title_sort | model of tuberculosis clustering in low incidence countries reveals more transmission in the united kingdom than the netherlands between 2010 and 2015 |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7141699/ https://www.ncbi.nlm.nih.gov/pubmed/32218567 http://dx.doi.org/10.1371/journal.pcbi.1007687 |
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