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Proteomic Reference Map and Comparative Analysis between Streptomyces griseus S4-7 and wbiE2 Transcription Factor-Mutant Strain

Streptomyces griseus S4-7, a well-characterized keystone taxon among strawberry microbial communities, shows exceptional disease-preventing ability. The whole-genome sequence, functional genes, and bioactive secondary metabolites of the strain have been described in previous studies. However, proteo...

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Autores principales: Kim, Jisu, Kwon, Young Sang, Bae, Dong-Won, Kwak, Youn-Sig
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Society of Plant Pathology 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7143519/
https://www.ncbi.nlm.nih.gov/pubmed/32296298
http://dx.doi.org/10.5423/PPJ.NT.02.2020.0037
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author Kim, Jisu
Kwon, Young Sang
Bae, Dong-Won
Kwak, Youn-Sig
author_facet Kim, Jisu
Kwon, Young Sang
Bae, Dong-Won
Kwak, Youn-Sig
author_sort Kim, Jisu
collection PubMed
description Streptomyces griseus S4-7, a well-characterized keystone taxon among strawberry microbial communities, shows exceptional disease-preventing ability. The whole-genome sequence, functional genes, and bioactive secondary metabolites of the strain have been described in previous studies. However, proteomics studies of not only the S4-7 strain, but also the Streptomyces genus as a whole, remain limited to date. Therefore, in the present study, we created a proteomics reference map for S. griseus S4-7. Additionally, analysis of differentially expressed proteins was performed against a wblE2 mutant, which was deficient in spore chain development and did not express an antifungal activity-regulatory transcription factor. We believe that our data provide a foundation for further in-depth studies of functional keystone taxa of the phytobiome and elucidation of the mechanisms underlying plant-microbe interactions, es-pecially those involving the Streptomyces genus.
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spelling pubmed-71435192020-04-15 Proteomic Reference Map and Comparative Analysis between Streptomyces griseus S4-7 and wbiE2 Transcription Factor-Mutant Strain Kim, Jisu Kwon, Young Sang Bae, Dong-Won Kwak, Youn-Sig Plant Pathol J Note Streptomyces griseus S4-7, a well-characterized keystone taxon among strawberry microbial communities, shows exceptional disease-preventing ability. The whole-genome sequence, functional genes, and bioactive secondary metabolites of the strain have been described in previous studies. However, proteomics studies of not only the S4-7 strain, but also the Streptomyces genus as a whole, remain limited to date. Therefore, in the present study, we created a proteomics reference map for S. griseus S4-7. Additionally, analysis of differentially expressed proteins was performed against a wblE2 mutant, which was deficient in spore chain development and did not express an antifungal activity-regulatory transcription factor. We believe that our data provide a foundation for further in-depth studies of functional keystone taxa of the phytobiome and elucidation of the mechanisms underlying plant-microbe interactions, es-pecially those involving the Streptomyces genus. Korean Society of Plant Pathology 2020-04-01 2020-04-01 /pmc/articles/PMC7143519/ /pubmed/32296298 http://dx.doi.org/10.5423/PPJ.NT.02.2020.0037 Text en © The Korean Society of Plant Pathology This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Note
Kim, Jisu
Kwon, Young Sang
Bae, Dong-Won
Kwak, Youn-Sig
Proteomic Reference Map and Comparative Analysis between Streptomyces griseus S4-7 and wbiE2 Transcription Factor-Mutant Strain
title Proteomic Reference Map and Comparative Analysis between Streptomyces griseus S4-7 and wbiE2 Transcription Factor-Mutant Strain
title_full Proteomic Reference Map and Comparative Analysis between Streptomyces griseus S4-7 and wbiE2 Transcription Factor-Mutant Strain
title_fullStr Proteomic Reference Map and Comparative Analysis between Streptomyces griseus S4-7 and wbiE2 Transcription Factor-Mutant Strain
title_full_unstemmed Proteomic Reference Map and Comparative Analysis between Streptomyces griseus S4-7 and wbiE2 Transcription Factor-Mutant Strain
title_short Proteomic Reference Map and Comparative Analysis between Streptomyces griseus S4-7 and wbiE2 Transcription Factor-Mutant Strain
title_sort proteomic reference map and comparative analysis between streptomyces griseus s4-7 and wbie2 transcription factor-mutant strain
topic Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7143519/
https://www.ncbi.nlm.nih.gov/pubmed/32296298
http://dx.doi.org/10.5423/PPJ.NT.02.2020.0037
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