Cargando…
Proteomic Reference Map and Comparative Analysis between Streptomyces griseus S4-7 and wbiE2 Transcription Factor-Mutant Strain
Streptomyces griseus S4-7, a well-characterized keystone taxon among strawberry microbial communities, shows exceptional disease-preventing ability. The whole-genome sequence, functional genes, and bioactive secondary metabolites of the strain have been described in previous studies. However, proteo...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korean Society of Plant Pathology
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7143519/ https://www.ncbi.nlm.nih.gov/pubmed/32296298 http://dx.doi.org/10.5423/PPJ.NT.02.2020.0037 |
_version_ | 1783519631343878144 |
---|---|
author | Kim, Jisu Kwon, Young Sang Bae, Dong-Won Kwak, Youn-Sig |
author_facet | Kim, Jisu Kwon, Young Sang Bae, Dong-Won Kwak, Youn-Sig |
author_sort | Kim, Jisu |
collection | PubMed |
description | Streptomyces griseus S4-7, a well-characterized keystone taxon among strawberry microbial communities, shows exceptional disease-preventing ability. The whole-genome sequence, functional genes, and bioactive secondary metabolites of the strain have been described in previous studies. However, proteomics studies of not only the S4-7 strain, but also the Streptomyces genus as a whole, remain limited to date. Therefore, in the present study, we created a proteomics reference map for S. griseus S4-7. Additionally, analysis of differentially expressed proteins was performed against a wblE2 mutant, which was deficient in spore chain development and did not express an antifungal activity-regulatory transcription factor. We believe that our data provide a foundation for further in-depth studies of functional keystone taxa of the phytobiome and elucidation of the mechanisms underlying plant-microbe interactions, es-pecially those involving the Streptomyces genus. |
format | Online Article Text |
id | pubmed-7143519 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Korean Society of Plant Pathology |
record_format | MEDLINE/PubMed |
spelling | pubmed-71435192020-04-15 Proteomic Reference Map and Comparative Analysis between Streptomyces griseus S4-7 and wbiE2 Transcription Factor-Mutant Strain Kim, Jisu Kwon, Young Sang Bae, Dong-Won Kwak, Youn-Sig Plant Pathol J Note Streptomyces griseus S4-7, a well-characterized keystone taxon among strawberry microbial communities, shows exceptional disease-preventing ability. The whole-genome sequence, functional genes, and bioactive secondary metabolites of the strain have been described in previous studies. However, proteomics studies of not only the S4-7 strain, but also the Streptomyces genus as a whole, remain limited to date. Therefore, in the present study, we created a proteomics reference map for S. griseus S4-7. Additionally, analysis of differentially expressed proteins was performed against a wblE2 mutant, which was deficient in spore chain development and did not express an antifungal activity-regulatory transcription factor. We believe that our data provide a foundation for further in-depth studies of functional keystone taxa of the phytobiome and elucidation of the mechanisms underlying plant-microbe interactions, es-pecially those involving the Streptomyces genus. Korean Society of Plant Pathology 2020-04-01 2020-04-01 /pmc/articles/PMC7143519/ /pubmed/32296298 http://dx.doi.org/10.5423/PPJ.NT.02.2020.0037 Text en © The Korean Society of Plant Pathology This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Note Kim, Jisu Kwon, Young Sang Bae, Dong-Won Kwak, Youn-Sig Proteomic Reference Map and Comparative Analysis between Streptomyces griseus S4-7 and wbiE2 Transcription Factor-Mutant Strain |
title | Proteomic Reference Map and Comparative Analysis between Streptomyces griseus S4-7 and wbiE2 Transcription Factor-Mutant Strain |
title_full | Proteomic Reference Map and Comparative Analysis between Streptomyces griseus S4-7 and wbiE2 Transcription Factor-Mutant Strain |
title_fullStr | Proteomic Reference Map and Comparative Analysis between Streptomyces griseus S4-7 and wbiE2 Transcription Factor-Mutant Strain |
title_full_unstemmed | Proteomic Reference Map and Comparative Analysis between Streptomyces griseus S4-7 and wbiE2 Transcription Factor-Mutant Strain |
title_short | Proteomic Reference Map and Comparative Analysis between Streptomyces griseus S4-7 and wbiE2 Transcription Factor-Mutant Strain |
title_sort | proteomic reference map and comparative analysis between streptomyces griseus s4-7 and wbie2 transcription factor-mutant strain |
topic | Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7143519/ https://www.ncbi.nlm.nih.gov/pubmed/32296298 http://dx.doi.org/10.5423/PPJ.NT.02.2020.0037 |
work_keys_str_mv | AT kimjisu proteomicreferencemapandcomparativeanalysisbetweenstreptomycesgriseuss47andwbie2transcriptionfactormutantstrain AT kwonyoungsang proteomicreferencemapandcomparativeanalysisbetweenstreptomycesgriseuss47andwbie2transcriptionfactormutantstrain AT baedongwon proteomicreferencemapandcomparativeanalysisbetweenstreptomycesgriseuss47andwbie2transcriptionfactormutantstrain AT kwakyounsig proteomicreferencemapandcomparativeanalysisbetweenstreptomycesgriseuss47andwbie2transcriptionfactormutantstrain |