Cargando…

PHI-base: the pathogen–host interactions database

The pathogen–host interactions database (PHI-base) is available at www.phi-base.org. PHI-base contains expertly curated molecular and biological information on genes proven to affect the outcome of pathogen–host interactions reported in peer reviewed research articles. PHI-base also curates literatu...

Descripción completa

Detalles Bibliográficos
Autores principales:	Urban, Martin, Cuzick, Alayne, Seager, James, Wood, Valerie, Rutherford, Kim, Venkatesh, Shilpa Yagwakote, De Silva, Nishadi, Martinez, Manuel Carbajo, Pedro, Helder, Yates, Andy D, Hassani-Pak, Keywan, Hammond-Kosack, Kim E
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2020
Materias:	Database Issue
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7145647/ https://www.ncbi.nlm.nih.gov/pubmed/31733065 http://dx.doi.org/10.1093/nar/gkz904

Ejemplares similares

PHI-base in 2022: a multi-species phenotype database for Pathogen–Host Interactions
por: Urban, Martin, et al.
Publicado: (2021)

PHI-base: a new interface and further additions for the multi-species pathogen–host interactions database
por: Urban, Martin, et al.
Publicado: (2017)

The Pathogen-Host Interactions database (PHI-base): additions and future developments
por: Urban, Martin, et al.
Publicado: (2014)

PhytoPath: an integrative resource for plant pathogen genomics
por: Pedro, Helder, et al.
Publicado: (2016)

Using the pathogen-host interactions database (PHI-base) to investigate plant pathogen genomes and genes implicated in virulence
por: Urban, Martin, et al.
Publicado: (2015)

A framework for community curation of interspecies interactions literature
por: Cuzick, Alayne, et al.
Publicado: (2023)

Ensembl Genomes 2020—enabling non-vertebrate genomic research
por: Howe, Kevin L, et al.
Publicado: (2020)

Ensembl Genomes 2022: an expanding genome resource for non-vertebrates
por: Yates, Andrew D, et al.
Publicado: (2021)

Whole-genome analysis of Fusarium graminearum insertional mutants identifies virulence associated genes and unmasks untagged chromosomal deletions
por: Urban, Martin, et al.
Publicado: (2015)

The completed genome sequence of the pathogenic ascomycete fungus Fusarium graminearum
por: King, Robert, et al.
Publicado: (2015)

PomBase 2018: user-driven reimplementation of the fission yeast database provides rapid and intuitive access to diverse, interconnected information
por: Lock, Antonia, et al.
Publicado: (2019)

PomBase 2015: updates to the fission yeast database
por: McDowall, Mark D., et al.
Publicado: (2014)

Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species
por: Kersey, Paul Julian, et al.
Publicado: (2018)

PHI-base: a new database for pathogen host interactions
por: Winnenburg, Rainer, et al.
Publicado: (2006)

TISMO: syngeneic mouse tumor database to model tumor immunity and immunotherapy response
por: Zeng, Zexian, et al.
Publicado: (2021)

ChimerDB 4.0: an updated and expanded database of fusion genes
por: Jang, Ye Eun, et al.
Publicado: (2020)

PHI-base update: additions to the pathogen–host interaction database
por: Winnenburg, Rainer, et al.
Publicado: (2008)

FusionGDB: fusion gene annotation DataBase
por: Kim, Pora, et al.
Publicado: (2019)

MRPrimerV: a database of PCR primers for RNA virus detection
por: Kim, Hyerin, et al.
Publicado: (2017)

The Ensembl COVID-19 resource: ongoing integration of public SARS-CoV-2 data
por: De Silva, Nishadi H, et al.
Publicado: (2021)

3DIV: A 3D-genome Interaction Viewer and database
por: Yang, Dongchan, et al.
Publicado: (2018)

iCSDB: an integrated database of CRISPR screens
por: Choi, Ahyoung, et al.
Publicado: (2020)

IPD-MHC 2.0: an improved inter-species database for the study of the major histocompatibility complex
por: Maccari, Giuseppe, et al.
Publicado: (2017)

GWASdb v2: an update database for human genetic variants identified by genome-wide association studies
por: Li, Mulin Jun, et al.
Publicado: (2016)

ccmGDB: a database for cancer cell metabolism genes
por: Kim, Pora, et al.
Publicado: (2016)

TissGDB: tissue-specific gene database in cancer
por: Kim, Pora, et al.
Publicado: (2018)

TRRUST v2: an expanded reference database of human and mouse transcriptional regulatory interactions
por: Han, Heonjong, et al.
Publicado: (2018)

SoyNet: a database of co-functional networks for soybean Glycine max
por: Kim, Eiru, et al.
Publicado: (2017)

HumanNet v3: an improved database of human gene networks for disease research
por: Kim, Chan Yeong, et al.
Publicado: (2021)

mutLBSgeneDB: mutated ligand binding site gene DataBase
por: Kim, Pora, et al.
Publicado: (2017)

The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species
por: Shefchek, Kent A, et al.
Publicado: (2020)

The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications
por: Nilsson, Rolf Henrik, et al.
Publicado: (2019)

ChimerDB 3.0: an enhanced database for fusion genes from cancer transcriptome and literature data mining
por: Lee, Myunggyo, et al.
Publicado: (2017)

PubChem Substance and Compound databases
por: Kim, Sunghwan, et al.
Publicado: (2016)

Database resources of the National Center for Biotechnology Information
por: Sayers, Eric W, et al.
Publicado: (2019)

AtMAD: Arabidopsis thaliana multi-omics association database
por: Lan, Yiheng, et al.
Publicado: (2020)

CAUSALdb: a database for disease/trait causal variants identified using summary statistics of genome-wide association studies
por: Wang, Jianhua, et al.
Publicado: (2020)

HGTree: database of horizontally transferred genes determined by tree reconciliation
por: Jeong, Hyeonsoo, et al.
Publicado: (2016)

FlyPhy: a phylogenomic analysis platform for Drosophila genes and gene families
por: Wu, Jinyu, et al.
Publicado: (2009)

phiBIOTICS: catalogue of therapeutic enzybiotics, relevant research studies and practical applications
por: Hojckova, Katarina, et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_e3k4emf21m3e9o3sgkibddsqqg