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Towards implementation of AI in New Zealand national diabetic screening program: Cloud-based, robust, and bespoke

Convolutional Neural Networks (CNNs) have become a prominent method of AI implementation in medical classification tasks. Grading Diabetic Retinopathy (DR) has been at the forefront of the development of AI for ophthalmology. However, major obstacles remain in the generalization of these CNNs onto r...

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Detalles Bibliográficos
Autores principales: Xie, Li, Yang, Song, Squirrell, David, Vaghefi, Ehsan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7147747/
https://www.ncbi.nlm.nih.gov/pubmed/32275656
http://dx.doi.org/10.1371/journal.pone.0225015
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author Xie, Li
Yang, Song
Squirrell, David
Vaghefi, Ehsan
author_facet Xie, Li
Yang, Song
Squirrell, David
Vaghefi, Ehsan
author_sort Xie, Li
collection PubMed
description Convolutional Neural Networks (CNNs) have become a prominent method of AI implementation in medical classification tasks. Grading Diabetic Retinopathy (DR) has been at the forefront of the development of AI for ophthalmology. However, major obstacles remain in the generalization of these CNNs onto real-world DR screening programs. We believe these difficulties are due to use of 1) small training datasets (<5,000 images), 2) private and ‘curated’ repositories, 3) locally implemented CNN implementation methods, while 4) relying on measured Area Under the Curve (AUC) as the sole measure of CNN performance. To address these issues, the public EyePACS Kaggle Diabetic Retinopathy dataset was uploaded onto Microsoft Azure(™) cloud platform. Two CNNs were trained; 1 a “Quality Assurance”, and 2. a “Classifier”. The Diabetic Retinopathy classifier CNN (DRCNN) performance was then tested both on ‘un-curated’ as well as the ‘curated’ test set created by the “Quality Assessment” CNN model. Finally, the sensitivity of the DRCNNs was boosted using two post-training techniques. Our DRCNN proved to be robust, as its performance was similar on ‘curated’ and ‘un-curated’ test sets. The implementation of ‘cascading thresholds’ and ‘max margin’ techniques led to significant improvements in the DRCNN’s sensitivity, while also enhancing the specificity of other grades.
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spelling pubmed-71477472020-04-14 Towards implementation of AI in New Zealand national diabetic screening program: Cloud-based, robust, and bespoke Xie, Li Yang, Song Squirrell, David Vaghefi, Ehsan PLoS One Research Article Convolutional Neural Networks (CNNs) have become a prominent method of AI implementation in medical classification tasks. Grading Diabetic Retinopathy (DR) has been at the forefront of the development of AI for ophthalmology. However, major obstacles remain in the generalization of these CNNs onto real-world DR screening programs. We believe these difficulties are due to use of 1) small training datasets (<5,000 images), 2) private and ‘curated’ repositories, 3) locally implemented CNN implementation methods, while 4) relying on measured Area Under the Curve (AUC) as the sole measure of CNN performance. To address these issues, the public EyePACS Kaggle Diabetic Retinopathy dataset was uploaded onto Microsoft Azure(™) cloud platform. Two CNNs were trained; 1 a “Quality Assurance”, and 2. a “Classifier”. The Diabetic Retinopathy classifier CNN (DRCNN) performance was then tested both on ‘un-curated’ as well as the ‘curated’ test set created by the “Quality Assessment” CNN model. Finally, the sensitivity of the DRCNNs was boosted using two post-training techniques. Our DRCNN proved to be robust, as its performance was similar on ‘curated’ and ‘un-curated’ test sets. The implementation of ‘cascading thresholds’ and ‘max margin’ techniques led to significant improvements in the DRCNN’s sensitivity, while also enhancing the specificity of other grades. Public Library of Science 2020-04-10 /pmc/articles/PMC7147747/ /pubmed/32275656 http://dx.doi.org/10.1371/journal.pone.0225015 Text en © 2020 Xie et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Xie, Li
Yang, Song
Squirrell, David
Vaghefi, Ehsan
Towards implementation of AI in New Zealand national diabetic screening program: Cloud-based, robust, and bespoke
title Towards implementation of AI in New Zealand national diabetic screening program: Cloud-based, robust, and bespoke
title_full Towards implementation of AI in New Zealand national diabetic screening program: Cloud-based, robust, and bespoke
title_fullStr Towards implementation of AI in New Zealand national diabetic screening program: Cloud-based, robust, and bespoke
title_full_unstemmed Towards implementation of AI in New Zealand national diabetic screening program: Cloud-based, robust, and bespoke
title_short Towards implementation of AI in New Zealand national diabetic screening program: Cloud-based, robust, and bespoke
title_sort towards implementation of ai in new zealand national diabetic screening program: cloud-based, robust, and bespoke
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7147747/
https://www.ncbi.nlm.nih.gov/pubmed/32275656
http://dx.doi.org/10.1371/journal.pone.0225015
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