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Computing Bayes factors for evidence-accumulation models using Warp-III bridge sampling
Over the last decade, the Bayesian estimation of evidence-accumulation models has gained popularity, largely due to the advantages afforded by the Bayesian hierarchical framework. Despite recent advances in the Bayesian estimation of evidence-accumulation models, model comparison continues to rely o...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7148283/ https://www.ncbi.nlm.nih.gov/pubmed/31755028 http://dx.doi.org/10.3758/s13428-019-01290-6 |
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author | Gronau, Quentin F. Heathcote, Andrew Matzke, Dora |
author_facet | Gronau, Quentin F. Heathcote, Andrew Matzke, Dora |
author_sort | Gronau, Quentin F. |
collection | PubMed |
description | Over the last decade, the Bayesian estimation of evidence-accumulation models has gained popularity, largely due to the advantages afforded by the Bayesian hierarchical framework. Despite recent advances in the Bayesian estimation of evidence-accumulation models, model comparison continues to rely on suboptimal procedures, such as posterior parameter inference and model selection criteria known to favor overly complex models. In this paper, we advocate model comparison for evidence-accumulation models based on the Bayes factor obtained via Warp-III bridge sampling. We demonstrate, using the linear ballistic accumulator (LBA), that Warp-III sampling provides a powerful and flexible approach that can be applied to both nested and non-nested model comparisons, even in complex and high-dimensional hierarchical instantiations of the LBA. We provide an easy-to-use software implementation of the Warp-III sampler and outline a series of recommendations aimed at facilitating the use of Warp-III sampling in practical applications. |
format | Online Article Text |
id | pubmed-7148283 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-71482832020-04-16 Computing Bayes factors for evidence-accumulation models using Warp-III bridge sampling Gronau, Quentin F. Heathcote, Andrew Matzke, Dora Behav Res Methods Article Over the last decade, the Bayesian estimation of evidence-accumulation models has gained popularity, largely due to the advantages afforded by the Bayesian hierarchical framework. Despite recent advances in the Bayesian estimation of evidence-accumulation models, model comparison continues to rely on suboptimal procedures, such as posterior parameter inference and model selection criteria known to favor overly complex models. In this paper, we advocate model comparison for evidence-accumulation models based on the Bayes factor obtained via Warp-III bridge sampling. We demonstrate, using the linear ballistic accumulator (LBA), that Warp-III sampling provides a powerful and flexible approach that can be applied to both nested and non-nested model comparisons, even in complex and high-dimensional hierarchical instantiations of the LBA. We provide an easy-to-use software implementation of the Warp-III sampler and outline a series of recommendations aimed at facilitating the use of Warp-III sampling in practical applications. Springer US 2019-11-21 2020 /pmc/articles/PMC7148283/ /pubmed/31755028 http://dx.doi.org/10.3758/s13428-019-01290-6 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Article Gronau, Quentin F. Heathcote, Andrew Matzke, Dora Computing Bayes factors for evidence-accumulation models using Warp-III bridge sampling |
title | Computing Bayes factors for evidence-accumulation models using Warp-III bridge sampling |
title_full | Computing Bayes factors for evidence-accumulation models using Warp-III bridge sampling |
title_fullStr | Computing Bayes factors for evidence-accumulation models using Warp-III bridge sampling |
title_full_unstemmed | Computing Bayes factors for evidence-accumulation models using Warp-III bridge sampling |
title_short | Computing Bayes factors for evidence-accumulation models using Warp-III bridge sampling |
title_sort | computing bayes factors for evidence-accumulation models using warp-iii bridge sampling |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7148283/ https://www.ncbi.nlm.nih.gov/pubmed/31755028 http://dx.doi.org/10.3758/s13428-019-01290-6 |
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