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Similarity of salivary microbiome in parents and adult children

BACKGROUND: Human saliva contains approximately 700 bacterial species. It has been reported that the salivary microbiome of a large family of closely related individuals consisting of multiple households is similar but the relatedness of salivary bacteria between generations of parents and their chi...

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Autores principales: Sundström, Kati, Mishra, Pashupati P., Pyysalo, Mikko J., Lehtimäki, Terho, Karhunen, Pekka J., Pessi, Tanja
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7151748/
https://www.ncbi.nlm.nih.gov/pubmed/32296599
http://dx.doi.org/10.7717/peerj.8799
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author Sundström, Kati
Mishra, Pashupati P.
Pyysalo, Mikko J.
Lehtimäki, Terho
Karhunen, Pekka J.
Pessi, Tanja
author_facet Sundström, Kati
Mishra, Pashupati P.
Pyysalo, Mikko J.
Lehtimäki, Terho
Karhunen, Pekka J.
Pessi, Tanja
author_sort Sundström, Kati
collection PubMed
description BACKGROUND: Human saliva contains approximately 700 bacterial species. It has been reported that the salivary microbiome of a large family of closely related individuals consisting of multiple households is similar but the relatedness of salivary bacteria between generations of parents and their children has not yet been investigated. The objectives were to investigate the entirety of salivary bacterial DNA profiles and whether and how families share these profiles and also compare these communities between grandparents and their first daughter generations (F1) using 16S rRNA gene amplicon sequencing. RESULTS: The most abundant phyla in two separate families were Firmicutes, Bacteroidetes, Proteobacteria, Fusobacteria and Actinobacteria. Family ties explained 13% of the variance between individuals’ bacterial communities (R(2) = 0.13; P = 0.001). Mothers shared more OTUs with adult children compared to fathers, but this linkage seemed to be weaker in the nuclear family with older adult children. We identified 29 differentially abundant genus level OTUs (FDR < 0.05) between families, which accounted for 31% of the total identified genus level OTUs. CONCLUSIONS: Our results indicate that adult family members share bacterial communities and adult children were more similar to mothers than fathers. The observed similarity in oral microbiome between parent–child pairs seemed to weaken over time. We suggest that our analysis approach is suitable for relatedness study of multigenerational salivary bacteria microbiome.
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spelling pubmed-71517482020-04-15 Similarity of salivary microbiome in parents and adult children Sundström, Kati Mishra, Pashupati P. Pyysalo, Mikko J. Lehtimäki, Terho Karhunen, Pekka J. Pessi, Tanja PeerJ Bioinformatics BACKGROUND: Human saliva contains approximately 700 bacterial species. It has been reported that the salivary microbiome of a large family of closely related individuals consisting of multiple households is similar but the relatedness of salivary bacteria between generations of parents and their children has not yet been investigated. The objectives were to investigate the entirety of salivary bacterial DNA profiles and whether and how families share these profiles and also compare these communities between grandparents and their first daughter generations (F1) using 16S rRNA gene amplicon sequencing. RESULTS: The most abundant phyla in two separate families were Firmicutes, Bacteroidetes, Proteobacteria, Fusobacteria and Actinobacteria. Family ties explained 13% of the variance between individuals’ bacterial communities (R(2) = 0.13; P = 0.001). Mothers shared more OTUs with adult children compared to fathers, but this linkage seemed to be weaker in the nuclear family with older adult children. We identified 29 differentially abundant genus level OTUs (FDR < 0.05) between families, which accounted for 31% of the total identified genus level OTUs. CONCLUSIONS: Our results indicate that adult family members share bacterial communities and adult children were more similar to mothers than fathers. The observed similarity in oral microbiome between parent–child pairs seemed to weaken over time. We suggest that our analysis approach is suitable for relatedness study of multigenerational salivary bacteria microbiome. PeerJ Inc. 2020-04-09 /pmc/articles/PMC7151748/ /pubmed/32296599 http://dx.doi.org/10.7717/peerj.8799 Text en © 2020 Sundström et al. https://creativecommons.org/licenses/by-nc/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by-nc/4.0) , which permits using, remixing, and building upon the work non-commercially, as long as it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Sundström, Kati
Mishra, Pashupati P.
Pyysalo, Mikko J.
Lehtimäki, Terho
Karhunen, Pekka J.
Pessi, Tanja
Similarity of salivary microbiome in parents and adult children
title Similarity of salivary microbiome in parents and adult children
title_full Similarity of salivary microbiome in parents and adult children
title_fullStr Similarity of salivary microbiome in parents and adult children
title_full_unstemmed Similarity of salivary microbiome in parents and adult children
title_short Similarity of salivary microbiome in parents and adult children
title_sort similarity of salivary microbiome in parents and adult children
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7151748/
https://www.ncbi.nlm.nih.gov/pubmed/32296599
http://dx.doi.org/10.7717/peerj.8799
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