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Large-scale multivariate dataset on the characterization of microbiota diversity, microbial growth dynamics, metabolic spoilage volatilome and sensorial profiles of two industrially produced meat products subjected to changes in lactate concentration and packaging atmosphere

Data in this article provide detailed information on the diversity of bacterial communities present on 576 samples of raw pork or poultry sausages produced industrially in 2017. Bacterial growth dynamics and diversity were monitored throughout the refrigerated storage period to estimate the impact o...

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Autores principales: Poirier, Simon, Luong, Ngoc-Du Martin, Anthoine, Valérie, Guillou, Sandrine, Membré, Jeanne-Marie, Moriceau, Nicolas, Rezé, Sandrine, Zagorec, Monique, Feurer, Carole, Frémaux, Bastien, Jeuge, Sabine, Robieu, Emeline, Champomier-Vergès, Marie, Coeuret, Gwendoline, Cauchie, Emilie, Daube, Georges, Korsak, Nicolas, Coroller, Louis, Desriac, Noémie, Desmonts, Marie-Hélène, Gohier, Rodérick, Werner, Dalal, Loux, Valentin, Rué, Olivier, Dohollou, Marie-Hélène, Defosse, Tatiana, Chaillou, Stéphane
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7152715/
https://www.ncbi.nlm.nih.gov/pubmed/32300619
http://dx.doi.org/10.1016/j.dib.2020.105453
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author Poirier, Simon
Luong, Ngoc-Du Martin
Anthoine, Valérie
Guillou, Sandrine
Membré, Jeanne-Marie
Moriceau, Nicolas
Rezé, Sandrine
Zagorec, Monique
Feurer, Carole
Frémaux, Bastien
Jeuge, Sabine
Robieu, Emeline
Champomier-Vergès, Marie
Coeuret, Gwendoline
Cauchie, Emilie
Daube, Georges
Korsak, Nicolas
Coroller, Louis
Desriac, Noémie
Desmonts, Marie-Hélène
Gohier, Rodérick
Werner, Dalal
Loux, Valentin
Rué, Olivier
Dohollou, Marie-Hélène
Defosse, Tatiana
Chaillou, Stéphane
author_facet Poirier, Simon
Luong, Ngoc-Du Martin
Anthoine, Valérie
Guillou, Sandrine
Membré, Jeanne-Marie
Moriceau, Nicolas
Rezé, Sandrine
Zagorec, Monique
Feurer, Carole
Frémaux, Bastien
Jeuge, Sabine
Robieu, Emeline
Champomier-Vergès, Marie
Coeuret, Gwendoline
Cauchie, Emilie
Daube, Georges
Korsak, Nicolas
Coroller, Louis
Desriac, Noémie
Desmonts, Marie-Hélène
Gohier, Rodérick
Werner, Dalal
Loux, Valentin
Rué, Olivier
Dohollou, Marie-Hélène
Defosse, Tatiana
Chaillou, Stéphane
author_sort Poirier, Simon
collection PubMed
description Data in this article provide detailed information on the diversity of bacterial communities present on 576 samples of raw pork or poultry sausages produced industrially in 2017. Bacterial growth dynamics and diversity were monitored throughout the refrigerated storage period to estimate the impact of packaging atmosphere and the use of potassium lactate as chemical preservative. The data include several types of analysis aiming at providing a comprehensive microbial ecology of spoilage during storage and how the process parameters do influence this phenomenon. The analysis includes: the gas content in packaging, pH, chromametric measurements, plate counts (total mesophilic aerobic flora and lactic acid bacteria), sensorial properties of the products, meta-metabolomic quantification of volatile organic compounds and bacterial community metagenetic analysis. Bacterial diversity was monitored using two types of amplicon sequencing (16S rRNA and GyrB encoding genes) at different time points for the different conditions (576 samples for gyrB and 436 samples for 16S rDNA). Sequencing data were generated by using Illumina MiSeq. The sequencing data have been deposited in the bioproject PRJNA522361. Samples accession numbers vary from SAMN10964863 to SAMN10965438 for gyrB amplicon and from SAMN10970131 to SAMN10970566 for 16S.
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spelling pubmed-71527152020-04-16 Large-scale multivariate dataset on the characterization of microbiota diversity, microbial growth dynamics, metabolic spoilage volatilome and sensorial profiles of two industrially produced meat products subjected to changes in lactate concentration and packaging atmosphere Poirier, Simon Luong, Ngoc-Du Martin Anthoine, Valérie Guillou, Sandrine Membré, Jeanne-Marie Moriceau, Nicolas Rezé, Sandrine Zagorec, Monique Feurer, Carole Frémaux, Bastien Jeuge, Sabine Robieu, Emeline Champomier-Vergès, Marie Coeuret, Gwendoline Cauchie, Emilie Daube, Georges Korsak, Nicolas Coroller, Louis Desriac, Noémie Desmonts, Marie-Hélène Gohier, Rodérick Werner, Dalal Loux, Valentin Rué, Olivier Dohollou, Marie-Hélène Defosse, Tatiana Chaillou, Stéphane Data Brief Agricultural and Biological Science Data in this article provide detailed information on the diversity of bacterial communities present on 576 samples of raw pork or poultry sausages produced industrially in 2017. Bacterial growth dynamics and diversity were monitored throughout the refrigerated storage period to estimate the impact of packaging atmosphere and the use of potassium lactate as chemical preservative. The data include several types of analysis aiming at providing a comprehensive microbial ecology of spoilage during storage and how the process parameters do influence this phenomenon. The analysis includes: the gas content in packaging, pH, chromametric measurements, plate counts (total mesophilic aerobic flora and lactic acid bacteria), sensorial properties of the products, meta-metabolomic quantification of volatile organic compounds and bacterial community metagenetic analysis. Bacterial diversity was monitored using two types of amplicon sequencing (16S rRNA and GyrB encoding genes) at different time points for the different conditions (576 samples for gyrB and 436 samples for 16S rDNA). Sequencing data were generated by using Illumina MiSeq. The sequencing data have been deposited in the bioproject PRJNA522361. Samples accession numbers vary from SAMN10964863 to SAMN10965438 for gyrB amplicon and from SAMN10970131 to SAMN10970566 for 16S. Elsevier 2020-03-20 /pmc/articles/PMC7152715/ /pubmed/32300619 http://dx.doi.org/10.1016/j.dib.2020.105453 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Agricultural and Biological Science
Poirier, Simon
Luong, Ngoc-Du Martin
Anthoine, Valérie
Guillou, Sandrine
Membré, Jeanne-Marie
Moriceau, Nicolas
Rezé, Sandrine
Zagorec, Monique
Feurer, Carole
Frémaux, Bastien
Jeuge, Sabine
Robieu, Emeline
Champomier-Vergès, Marie
Coeuret, Gwendoline
Cauchie, Emilie
Daube, Georges
Korsak, Nicolas
Coroller, Louis
Desriac, Noémie
Desmonts, Marie-Hélène
Gohier, Rodérick
Werner, Dalal
Loux, Valentin
Rué, Olivier
Dohollou, Marie-Hélène
Defosse, Tatiana
Chaillou, Stéphane
Large-scale multivariate dataset on the characterization of microbiota diversity, microbial growth dynamics, metabolic spoilage volatilome and sensorial profiles of two industrially produced meat products subjected to changes in lactate concentration and packaging atmosphere
title Large-scale multivariate dataset on the characterization of microbiota diversity, microbial growth dynamics, metabolic spoilage volatilome and sensorial profiles of two industrially produced meat products subjected to changes in lactate concentration and packaging atmosphere
title_full Large-scale multivariate dataset on the characterization of microbiota diversity, microbial growth dynamics, metabolic spoilage volatilome and sensorial profiles of two industrially produced meat products subjected to changes in lactate concentration and packaging atmosphere
title_fullStr Large-scale multivariate dataset on the characterization of microbiota diversity, microbial growth dynamics, metabolic spoilage volatilome and sensorial profiles of two industrially produced meat products subjected to changes in lactate concentration and packaging atmosphere
title_full_unstemmed Large-scale multivariate dataset on the characterization of microbiota diversity, microbial growth dynamics, metabolic spoilage volatilome and sensorial profiles of two industrially produced meat products subjected to changes in lactate concentration and packaging atmosphere
title_short Large-scale multivariate dataset on the characterization of microbiota diversity, microbial growth dynamics, metabolic spoilage volatilome and sensorial profiles of two industrially produced meat products subjected to changes in lactate concentration and packaging atmosphere
title_sort large-scale multivariate dataset on the characterization of microbiota diversity, microbial growth dynamics, metabolic spoilage volatilome and sensorial profiles of two industrially produced meat products subjected to changes in lactate concentration and packaging atmosphere
topic Agricultural and Biological Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7152715/
https://www.ncbi.nlm.nih.gov/pubmed/32300619
http://dx.doi.org/10.1016/j.dib.2020.105453
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