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Multiclassifier fusion based on radiomics features for the prediction of benign and malignant primary pulmonary solid nodules
BACKGROUND: To test the ability of a multiclassifier model based on radiomics features to predict benign and malignant primary pulmonary solid nodules. METHODS: Computed tomography (CT) images of 342 patients with primary pulmonary solid nodules confirmed by histopathology or follow-up were retrospe...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7154443/ https://www.ncbi.nlm.nih.gov/pubmed/32309318 http://dx.doi.org/10.21037/atm.2020.01.135 |
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author | Shen, Yao Xu, Fangyi Zhu, Wenchao Hu, Hongjie Chen, Ting Li, Qiang |
author_facet | Shen, Yao Xu, Fangyi Zhu, Wenchao Hu, Hongjie Chen, Ting Li, Qiang |
author_sort | Shen, Yao |
collection | PubMed |
description | BACKGROUND: To test the ability of a multiclassifier model based on radiomics features to predict benign and malignant primary pulmonary solid nodules. METHODS: Computed tomography (CT) images of 342 patients with primary pulmonary solid nodules confirmed by histopathology or follow-up were retrospectively analyzed. The region of interest (ROI) of the images was delineated, and the radiomics features of the lesions were extracted. The feature weight was calculated using the relief feature selection algorithm. Based on the selected features, five classifier models were constructed: support vector machine (SVM), random forest (RF), logistic regression (LR), extreme learning machine (ELM), and K-nearest neighbor (KNN). The precision, recall rate, and area under the receiver operating characteristic curve (AUC) were used to evaluate the prediction performance of each classifier. The prediction result of each classifier was first weighted, and then all the prediction results were fused to predict the nodule type of unknown images. The prediction precision, recall rate, and AUC of the fusion classifier and single classifier were compared. Cross-validation was used to evaluate the generalization of the fusion classifier, and t- and F-tests were performed on the five classifiers and fusion classifier. RESULTS: For each ROI, 450 features in four major categories were extracted and were analyzed using the relief feature selection algorithm. According to the weights, 25 highly repetitive and nonredundant stable features that played a major role in pulmonary nodule classification were selected. The fusion classifier’s prediction performance (prediction precision =92.0%, AUC =0.915) was superior to those of SVM (prediction precision =75.3%, AUC =0.740), RF (prediction precision =89.1%, AUC =0.855), LR (prediction precision =68.4%, AUC =0.681), ELM (prediction precision =87.0%, AUC =0.830), and KNN (prediction precision =77.1%, AUC =0.702). The fusion classifier showed the best null hypothesis performance in the t-test (P=0.035) and F-test (P=0.036). CONCLUSIONS: The multiclassifier fusion model based on radiomics features had high prediction value for benign and malignant primary pulmonary solid nodules. |
format | Online Article Text |
id | pubmed-7154443 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-71544432020-04-17 Multiclassifier fusion based on radiomics features for the prediction of benign and malignant primary pulmonary solid nodules Shen, Yao Xu, Fangyi Zhu, Wenchao Hu, Hongjie Chen, Ting Li, Qiang Ann Transl Med Original Article BACKGROUND: To test the ability of a multiclassifier model based on radiomics features to predict benign and malignant primary pulmonary solid nodules. METHODS: Computed tomography (CT) images of 342 patients with primary pulmonary solid nodules confirmed by histopathology or follow-up were retrospectively analyzed. The region of interest (ROI) of the images was delineated, and the radiomics features of the lesions were extracted. The feature weight was calculated using the relief feature selection algorithm. Based on the selected features, five classifier models were constructed: support vector machine (SVM), random forest (RF), logistic regression (LR), extreme learning machine (ELM), and K-nearest neighbor (KNN). The precision, recall rate, and area under the receiver operating characteristic curve (AUC) were used to evaluate the prediction performance of each classifier. The prediction result of each classifier was first weighted, and then all the prediction results were fused to predict the nodule type of unknown images. The prediction precision, recall rate, and AUC of the fusion classifier and single classifier were compared. Cross-validation was used to evaluate the generalization of the fusion classifier, and t- and F-tests were performed on the five classifiers and fusion classifier. RESULTS: For each ROI, 450 features in four major categories were extracted and were analyzed using the relief feature selection algorithm. According to the weights, 25 highly repetitive and nonredundant stable features that played a major role in pulmonary nodule classification were selected. The fusion classifier’s prediction performance (prediction precision =92.0%, AUC =0.915) was superior to those of SVM (prediction precision =75.3%, AUC =0.740), RF (prediction precision =89.1%, AUC =0.855), LR (prediction precision =68.4%, AUC =0.681), ELM (prediction precision =87.0%, AUC =0.830), and KNN (prediction precision =77.1%, AUC =0.702). The fusion classifier showed the best null hypothesis performance in the t-test (P=0.035) and F-test (P=0.036). CONCLUSIONS: The multiclassifier fusion model based on radiomics features had high prediction value for benign and malignant primary pulmonary solid nodules. AME Publishing Company 2020-03 /pmc/articles/PMC7154443/ /pubmed/32309318 http://dx.doi.org/10.21037/atm.2020.01.135 Text en 2020 Annals of Translational Medicine. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Original Article Shen, Yao Xu, Fangyi Zhu, Wenchao Hu, Hongjie Chen, Ting Li, Qiang Multiclassifier fusion based on radiomics features for the prediction of benign and malignant primary pulmonary solid nodules |
title | Multiclassifier fusion based on radiomics features for the prediction of benign and malignant primary pulmonary solid nodules |
title_full | Multiclassifier fusion based on radiomics features for the prediction of benign and malignant primary pulmonary solid nodules |
title_fullStr | Multiclassifier fusion based on radiomics features for the prediction of benign and malignant primary pulmonary solid nodules |
title_full_unstemmed | Multiclassifier fusion based on radiomics features for the prediction of benign and malignant primary pulmonary solid nodules |
title_short | Multiclassifier fusion based on radiomics features for the prediction of benign and malignant primary pulmonary solid nodules |
title_sort | multiclassifier fusion based on radiomics features for the prediction of benign and malignant primary pulmonary solid nodules |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7154443/ https://www.ncbi.nlm.nih.gov/pubmed/32309318 http://dx.doi.org/10.21037/atm.2020.01.135 |
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