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Dataset for the combined transcriptome assembly of M. oleifera and functional annotation

In this paper, we present the data acquired during transcriptome analysis of the plant Moringa oleifera [1] from five different tissues (root, stem, leaf, flower and seed) by RNA sequencing. A total of 271 million reads were assembled with an N50 of 2094 bp. The combined transcriptome was assessed f...

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Detalles Bibliográficos
Autores principales: Shafi, K. Mohamed, Joshi, Adwait G., Meenakshi, Iyer, Pasha, Shaik Naseer, Harini, K., Mahita, Jarjapu, Sajeevan, Radha Sivarajan, Karpe, Snehal D., Ghosh, Pritha, Nitish, Sathyanarayanan, Gandhimathi, A., Mathew, Oommen K., Prasanna, Subramanian Hari, Malini, Manoharan, Mutt, Eshita, Naika, Mahantesha, Ravooru, Nithin, Rao, Rajas M., Shingate, Prashant N., Sukhwal, Anshul, Sunitha, Margaret S., Upadhyay, Atul K., Vinekar, Rithvik S., Sowdhamini, Ramanathan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7155000/
https://www.ncbi.nlm.nih.gov/pubmed/32309524
http://dx.doi.org/10.1016/j.dib.2020.105416
Descripción
Sumario:In this paper, we present the data acquired during transcriptome analysis of the plant Moringa oleifera [1] from five different tissues (root, stem, leaf, flower and seed) by RNA sequencing. A total of 271 million reads were assembled with an N50 of 2094 bp. The combined transcriptome was assessed for transcript abundance across five tissues. The protein coding genes identified from the transcripts were annotated and used for orthology analysis. Further, enzymes involved in the biosynthesis of select medicinally important secondary metabolites, vitamins and ion transporters were identified and their expression levels across tissues were examined. The data generated by RNA sequencing has been deposited to NCBI public repository under the accession number PRJNA394193 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA394193).