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Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group
Telomere length attrition has been implicated in various complex disorders including Type 2 Diabetes (T2D). However, very few candidate gene association studies have been carried out worldwide targeting telomere maintenance genes. In the present study, variants in various critical telomere maintenan...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7160122/ https://www.ncbi.nlm.nih.gov/pubmed/32296102 http://dx.doi.org/10.1038/s41598-020-63510-w |
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author | Sethi, Itty Sharma, Varun Sharma, Indu Singh, Gurvinder Bhat, Gh. Rasool Bhanwer, A. J. S Sharma, Swarkar Rai, Ekta |
author_facet | Sethi, Itty Sharma, Varun Sharma, Indu Singh, Gurvinder Bhat, Gh. Rasool Bhanwer, A. J. S Sharma, Swarkar Rai, Ekta |
author_sort | Sethi, Itty |
collection | PubMed |
description | Telomere length attrition has been implicated in various complex disorders including Type 2 Diabetes (T2D). However, very few candidate gene association studies have been carried out worldwide targeting telomere maintenance genes. In the present study, variants in various critical telomere maintenance pathway genes for T2D susceptibility in Northwest Indian population were explored. With case-control candidate gene association study design, twelve variants from seven telomere maintenance genes were evaluated. Amongst these five variants, rs9419958 (OBFC1), rs4783704 (TERF2), rs16847897 (TERC/LRRC31), rs10936599 (TERC/MYNN), and rs74019828 (CSNK2A2) showed significant association with T2D (at p-value ≤ 0.003, threshold set after Bonferroni correction) in the studied population. In silico analyses of these variants indicated interesting functional roles that warrant experimental validations. Findings showed that variants in telomere maintenance genes are associated with pathogenesis of T2D in Northwest Indian population. We anticipate further, such candidate gene association studies in other Indian populations and worldwide would contribute in understanding the missing heritability of T2D. |
format | Online Article Text |
id | pubmed-7160122 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-71601222020-04-22 Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group Sethi, Itty Sharma, Varun Sharma, Indu Singh, Gurvinder Bhat, Gh. Rasool Bhanwer, A. J. S Sharma, Swarkar Rai, Ekta Sci Rep Article Telomere length attrition has been implicated in various complex disorders including Type 2 Diabetes (T2D). However, very few candidate gene association studies have been carried out worldwide targeting telomere maintenance genes. In the present study, variants in various critical telomere maintenance pathway genes for T2D susceptibility in Northwest Indian population were explored. With case-control candidate gene association study design, twelve variants from seven telomere maintenance genes were evaluated. Amongst these five variants, rs9419958 (OBFC1), rs4783704 (TERF2), rs16847897 (TERC/LRRC31), rs10936599 (TERC/MYNN), and rs74019828 (CSNK2A2) showed significant association with T2D (at p-value ≤ 0.003, threshold set after Bonferroni correction) in the studied population. In silico analyses of these variants indicated interesting functional roles that warrant experimental validations. Findings showed that variants in telomere maintenance genes are associated with pathogenesis of T2D in Northwest Indian population. We anticipate further, such candidate gene association studies in other Indian populations and worldwide would contribute in understanding the missing heritability of T2D. Nature Publishing Group UK 2020-04-15 /pmc/articles/PMC7160122/ /pubmed/32296102 http://dx.doi.org/10.1038/s41598-020-63510-w Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Sethi, Itty Sharma, Varun Sharma, Indu Singh, Gurvinder Bhat, Gh. Rasool Bhanwer, A. J. S Sharma, Swarkar Rai, Ekta Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group |
title | Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group |
title_full | Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group |
title_fullStr | Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group |
title_full_unstemmed | Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group |
title_short | Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group |
title_sort | telomere maintenance genes are associated with type 2 diabetes susceptibility in northwest indian population group |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7160122/ https://www.ncbi.nlm.nih.gov/pubmed/32296102 http://dx.doi.org/10.1038/s41598-020-63510-w |
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