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Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group

Telomere length attrition has been implicated in various complex disorders including Type 2 Diabetes (T2D). However, very few candidate gene association studies have been carried out worldwide targeting telomere maintenance genes. In the present study, variants in various critical telomere maintenan...

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Autores principales: Sethi, Itty, Sharma, Varun, Sharma, Indu, Singh, Gurvinder, Bhat, Gh. Rasool, Bhanwer, A. J. S, Sharma, Swarkar, Rai, Ekta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7160122/
https://www.ncbi.nlm.nih.gov/pubmed/32296102
http://dx.doi.org/10.1038/s41598-020-63510-w
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author Sethi, Itty
Sharma, Varun
Sharma, Indu
Singh, Gurvinder
Bhat, Gh. Rasool
Bhanwer, A. J. S
Sharma, Swarkar
Rai, Ekta
author_facet Sethi, Itty
Sharma, Varun
Sharma, Indu
Singh, Gurvinder
Bhat, Gh. Rasool
Bhanwer, A. J. S
Sharma, Swarkar
Rai, Ekta
author_sort Sethi, Itty
collection PubMed
description Telomere length attrition has been implicated in various complex disorders including Type 2 Diabetes (T2D). However, very few candidate gene association studies have been carried out worldwide targeting telomere maintenance genes. In the present study, variants in various critical telomere maintenance pathway genes for T2D susceptibility in Northwest Indian population were explored. With case-control candidate gene association study design, twelve variants from seven telomere maintenance genes were evaluated. Amongst these five variants, rs9419958 (OBFC1), rs4783704 (TERF2), rs16847897 (TERC/LRRC31), rs10936599 (TERC/MYNN), and rs74019828 (CSNK2A2) showed significant association with T2D (at p-value ≤ 0.003, threshold set after Bonferroni correction) in the studied population. In silico analyses of these variants indicated interesting functional roles that warrant experimental validations. Findings showed that variants in telomere maintenance genes are associated with pathogenesis of T2D in Northwest Indian population. We anticipate further, such candidate gene association studies in other Indian populations and worldwide would contribute in understanding the missing heritability of T2D.
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spelling pubmed-71601222020-04-22 Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group Sethi, Itty Sharma, Varun Sharma, Indu Singh, Gurvinder Bhat, Gh. Rasool Bhanwer, A. J. S Sharma, Swarkar Rai, Ekta Sci Rep Article Telomere length attrition has been implicated in various complex disorders including Type 2 Diabetes (T2D). However, very few candidate gene association studies have been carried out worldwide targeting telomere maintenance genes. In the present study, variants in various critical telomere maintenance pathway genes for T2D susceptibility in Northwest Indian population were explored. With case-control candidate gene association study design, twelve variants from seven telomere maintenance genes were evaluated. Amongst these five variants, rs9419958 (OBFC1), rs4783704 (TERF2), rs16847897 (TERC/LRRC31), rs10936599 (TERC/MYNN), and rs74019828 (CSNK2A2) showed significant association with T2D (at p-value ≤ 0.003, threshold set after Bonferroni correction) in the studied population. In silico analyses of these variants indicated interesting functional roles that warrant experimental validations. Findings showed that variants in telomere maintenance genes are associated with pathogenesis of T2D in Northwest Indian population. We anticipate further, such candidate gene association studies in other Indian populations and worldwide would contribute in understanding the missing heritability of T2D. Nature Publishing Group UK 2020-04-15 /pmc/articles/PMC7160122/ /pubmed/32296102 http://dx.doi.org/10.1038/s41598-020-63510-w Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Sethi, Itty
Sharma, Varun
Sharma, Indu
Singh, Gurvinder
Bhat, Gh. Rasool
Bhanwer, A. J. S
Sharma, Swarkar
Rai, Ekta
Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group
title Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group
title_full Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group
title_fullStr Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group
title_full_unstemmed Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group
title_short Telomere Maintenance Genes are associated with Type 2 Diabetes Susceptibility in Northwest Indian Population Group
title_sort telomere maintenance genes are associated with type 2 diabetes susceptibility in northwest indian population group
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7160122/
https://www.ncbi.nlm.nih.gov/pubmed/32296102
http://dx.doi.org/10.1038/s41598-020-63510-w
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