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Evidence for ligninolytic activity of the ascomycete fungus Podospora anserina

BACKGROUND: The ascomycete fungus Podospora anserina has been appreciated for its targeted carbohydrate-active enzymatic arsenal. As a late colonizer of herbivorous dung, the fungus acts specifically on the more recalcitrant fraction of lignocellulose and this lignin-rich biotope might have resulted...

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Autores principales: van Erven, Gijs, Kleijn, Anne F., Patyshakuliyeva, Aleksandrina, Di Falco, Marcos, Tsang, Adrian, de Vries, Ronald P., van Berkel, Willem J. H., Kabel, Mirjam A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7161253/
https://www.ncbi.nlm.nih.gov/pubmed/32322305
http://dx.doi.org/10.1186/s13068-020-01713-z
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author van Erven, Gijs
Kleijn, Anne F.
Patyshakuliyeva, Aleksandrina
Di Falco, Marcos
Tsang, Adrian
de Vries, Ronald P.
van Berkel, Willem J. H.
Kabel, Mirjam A.
author_facet van Erven, Gijs
Kleijn, Anne F.
Patyshakuliyeva, Aleksandrina
Di Falco, Marcos
Tsang, Adrian
de Vries, Ronald P.
van Berkel, Willem J. H.
Kabel, Mirjam A.
author_sort van Erven, Gijs
collection PubMed
description BACKGROUND: The ascomycete fungus Podospora anserina has been appreciated for its targeted carbohydrate-active enzymatic arsenal. As a late colonizer of herbivorous dung, the fungus acts specifically on the more recalcitrant fraction of lignocellulose and this lignin-rich biotope might have resulted in the evolution of ligninolytic activities. However, the lignin-degrading abilities of the fungus have not been demonstrated by chemical analyses at the molecular level and are, thus far, solely based on genome and secretome predictions. To evaluate whether P. anserina might provide a novel source of lignin-active enzymes to tap into for potential biotechnological applications, we comprehensively mapped wheat straw lignin during fungal growth and characterized the fungal secretome. RESULTS: Quantitative (13)C lignin internal standard py-GC–MS analysis showed substantial lignin removal during the 7 days of fungal growth (24% w/w), though carbohydrates were preferably targeted (58% w/w removal). Structural characterization of residual lignin by using py-GC–MS and HSQC NMR analyses demonstrated that C(α)-oxidized substructures significantly increased through fungal action, while intact β-O-4′ aryl ether linkages, p-coumarate and ferulate moieties decreased, albeit to lesser extents than observed for the action of basidiomycetes. Proteomic analysis indicated that the presence of lignin induced considerable changes in the secretome of P. anserina. This was particularly reflected in a strong reduction of cellulases and galactomannanases, while H(2)O(2)-producing enzymes clearly increased. The latter enzymes, together with laccases, were likely involved in the observed ligninolysis. CONCLUSIONS: For the first time, we provide unambiguous evidence for the ligninolytic activity of the ascomycete fungus P. anserina and expand the view on its enzymatic repertoire beyond carbohydrate degradation. Our results can be of significance for the development of biological lignin conversion technologies by contributing to the quest for novel lignin-active enzymes and organisms.
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spelling pubmed-71612532020-04-22 Evidence for ligninolytic activity of the ascomycete fungus Podospora anserina van Erven, Gijs Kleijn, Anne F. Patyshakuliyeva, Aleksandrina Di Falco, Marcos Tsang, Adrian de Vries, Ronald P. van Berkel, Willem J. H. Kabel, Mirjam A. Biotechnol Biofuels Research BACKGROUND: The ascomycete fungus Podospora anserina has been appreciated for its targeted carbohydrate-active enzymatic arsenal. As a late colonizer of herbivorous dung, the fungus acts specifically on the more recalcitrant fraction of lignocellulose and this lignin-rich biotope might have resulted in the evolution of ligninolytic activities. However, the lignin-degrading abilities of the fungus have not been demonstrated by chemical analyses at the molecular level and are, thus far, solely based on genome and secretome predictions. To evaluate whether P. anserina might provide a novel source of lignin-active enzymes to tap into for potential biotechnological applications, we comprehensively mapped wheat straw lignin during fungal growth and characterized the fungal secretome. RESULTS: Quantitative (13)C lignin internal standard py-GC–MS analysis showed substantial lignin removal during the 7 days of fungal growth (24% w/w), though carbohydrates were preferably targeted (58% w/w removal). Structural characterization of residual lignin by using py-GC–MS and HSQC NMR analyses demonstrated that C(α)-oxidized substructures significantly increased through fungal action, while intact β-O-4′ aryl ether linkages, p-coumarate and ferulate moieties decreased, albeit to lesser extents than observed for the action of basidiomycetes. Proteomic analysis indicated that the presence of lignin induced considerable changes in the secretome of P. anserina. This was particularly reflected in a strong reduction of cellulases and galactomannanases, while H(2)O(2)-producing enzymes clearly increased. The latter enzymes, together with laccases, were likely involved in the observed ligninolysis. CONCLUSIONS: For the first time, we provide unambiguous evidence for the ligninolytic activity of the ascomycete fungus P. anserina and expand the view on its enzymatic repertoire beyond carbohydrate degradation. Our results can be of significance for the development of biological lignin conversion technologies by contributing to the quest for novel lignin-active enzymes and organisms. BioMed Central 2020-04-16 /pmc/articles/PMC7161253/ /pubmed/32322305 http://dx.doi.org/10.1186/s13068-020-01713-z Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
van Erven, Gijs
Kleijn, Anne F.
Patyshakuliyeva, Aleksandrina
Di Falco, Marcos
Tsang, Adrian
de Vries, Ronald P.
van Berkel, Willem J. H.
Kabel, Mirjam A.
Evidence for ligninolytic activity of the ascomycete fungus Podospora anserina
title Evidence for ligninolytic activity of the ascomycete fungus Podospora anserina
title_full Evidence for ligninolytic activity of the ascomycete fungus Podospora anserina
title_fullStr Evidence for ligninolytic activity of the ascomycete fungus Podospora anserina
title_full_unstemmed Evidence for ligninolytic activity of the ascomycete fungus Podospora anserina
title_short Evidence for ligninolytic activity of the ascomycete fungus Podospora anserina
title_sort evidence for ligninolytic activity of the ascomycete fungus podospora anserina
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7161253/
https://www.ncbi.nlm.nih.gov/pubmed/32322305
http://dx.doi.org/10.1186/s13068-020-01713-z
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