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Risk prediction of two types of potential snail habitats in Anhui Province of China: Model-based approaches

Elimination of the intermediate snail host of Schistosoma is the most effective way to control schistosomiasis and the most important first step is to accurately identify the snail habitats. Due to the substantial resources required for traditional, manual snail-searching in the field, and potential...

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Autores principales: Zhang, Jun, Yue, Ming, Hu, Yi, Bergquist, Robert, Su, Chuan, Gao, Fenghua, Cao, Zhi-Guo, Zhang, Zhijie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7162538/
https://www.ncbi.nlm.nih.gov/pubmed/32251421
http://dx.doi.org/10.1371/journal.pntd.0008178
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author Zhang, Jun
Yue, Ming
Hu, Yi
Bergquist, Robert
Su, Chuan
Gao, Fenghua
Cao, Zhi-Guo
Zhang, Zhijie
author_facet Zhang, Jun
Yue, Ming
Hu, Yi
Bergquist, Robert
Su, Chuan
Gao, Fenghua
Cao, Zhi-Guo
Zhang, Zhijie
author_sort Zhang, Jun
collection PubMed
description Elimination of the intermediate snail host of Schistosoma is the most effective way to control schistosomiasis and the most important first step is to accurately identify the snail habitats. Due to the substantial resources required for traditional, manual snail-searching in the field, and potential risk of miss-classification of potential snail habitats by remote sensing, more convenient and precise methods are urgently needed. Snail data (N = 15,000) from two types of snail habitats (lake/marshland and hilly areas) in Anhui Province, a typical endemic area for schistosomiasis, were collected together with 36 environmental variables covering the whole province. Twelve different models were built and evaluated with indices, such as area under the curve (AUC), Kappa, percent correctly classified (PCC), sensitivity and specificity. We found the presence-absence models performing better than those based on presence-only. However, those derived from machine-learning, especially the random forest (RF) approach were preferable with all indices above 0.90. Distance to nearest river was found to be the most important variable for the lake/marshlands, while the climatic variables were more important for the hilly endemic areas. The predicted high-risk areas for potential snail habitats of the lake/marshland type exist mainly along the Yangtze River, while those of the hilly type are dispersed in the areas south of the Yangtze River. We provide here the first comprehensive risk profile of potential snail habitats based on precise examinations revealing the true distribution and habitat type, thereby improving efficiency and accuracy of snail control including better allocation of limited health resources.
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spelling pubmed-71625382020-04-24 Risk prediction of two types of potential snail habitats in Anhui Province of China: Model-based approaches Zhang, Jun Yue, Ming Hu, Yi Bergquist, Robert Su, Chuan Gao, Fenghua Cao, Zhi-Guo Zhang, Zhijie PLoS Negl Trop Dis Research Article Elimination of the intermediate snail host of Schistosoma is the most effective way to control schistosomiasis and the most important first step is to accurately identify the snail habitats. Due to the substantial resources required for traditional, manual snail-searching in the field, and potential risk of miss-classification of potential snail habitats by remote sensing, more convenient and precise methods are urgently needed. Snail data (N = 15,000) from two types of snail habitats (lake/marshland and hilly areas) in Anhui Province, a typical endemic area for schistosomiasis, were collected together with 36 environmental variables covering the whole province. Twelve different models were built and evaluated with indices, such as area under the curve (AUC), Kappa, percent correctly classified (PCC), sensitivity and specificity. We found the presence-absence models performing better than those based on presence-only. However, those derived from machine-learning, especially the random forest (RF) approach were preferable with all indices above 0.90. Distance to nearest river was found to be the most important variable for the lake/marshlands, while the climatic variables were more important for the hilly endemic areas. The predicted high-risk areas for potential snail habitats of the lake/marshland type exist mainly along the Yangtze River, while those of the hilly type are dispersed in the areas south of the Yangtze River. We provide here the first comprehensive risk profile of potential snail habitats based on precise examinations revealing the true distribution and habitat type, thereby improving efficiency and accuracy of snail control including better allocation of limited health resources. Public Library of Science 2020-04-06 /pmc/articles/PMC7162538/ /pubmed/32251421 http://dx.doi.org/10.1371/journal.pntd.0008178 Text en © 2020 Zhang et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Zhang, Jun
Yue, Ming
Hu, Yi
Bergquist, Robert
Su, Chuan
Gao, Fenghua
Cao, Zhi-Guo
Zhang, Zhijie
Risk prediction of two types of potential snail habitats in Anhui Province of China: Model-based approaches
title Risk prediction of two types of potential snail habitats in Anhui Province of China: Model-based approaches
title_full Risk prediction of two types of potential snail habitats in Anhui Province of China: Model-based approaches
title_fullStr Risk prediction of two types of potential snail habitats in Anhui Province of China: Model-based approaches
title_full_unstemmed Risk prediction of two types of potential snail habitats in Anhui Province of China: Model-based approaches
title_short Risk prediction of two types of potential snail habitats in Anhui Province of China: Model-based approaches
title_sort risk prediction of two types of potential snail habitats in anhui province of china: model-based approaches
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7162538/
https://www.ncbi.nlm.nih.gov/pubmed/32251421
http://dx.doi.org/10.1371/journal.pntd.0008178
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