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Robustness of the Dorsal morphogen gradient with respect to morphogen dosage

In multicellular organisms, the timing and placement of gene expression in a developing tissue assigns the fate of each cell in the embryo in order for a uniform field of cells to differentiate into a reproducible pattern of organs and tissues. This positional information is often achieved through t...

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Autores principales: Al Asafen, Hadel, Bandodkar, Prasad U., Carrell-Noel, Sophia, Schloop, Allison E., Friedman, Jeramey, Reeves, Gregory T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7162545/
https://www.ncbi.nlm.nih.gov/pubmed/32251432
http://dx.doi.org/10.1371/journal.pcbi.1007750
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author Al Asafen, Hadel
Bandodkar, Prasad U.
Carrell-Noel, Sophia
Schloop, Allison E.
Friedman, Jeramey
Reeves, Gregory T.
author_facet Al Asafen, Hadel
Bandodkar, Prasad U.
Carrell-Noel, Sophia
Schloop, Allison E.
Friedman, Jeramey
Reeves, Gregory T.
author_sort Al Asafen, Hadel
collection PubMed
description In multicellular organisms, the timing and placement of gene expression in a developing tissue assigns the fate of each cell in the embryo in order for a uniform field of cells to differentiate into a reproducible pattern of organs and tissues. This positional information is often achieved through the action of spatial gradients of morphogens. Spatial patterns of gene expression are paradoxically robust to variations in morphogen dosage, given that, by definition, gene expression must be sensitive to morphogen concentration. In this work we investigate the robustness of the Dorsal/NF-κB signaling module with respect to perturbations to the dosage of maternally-expressed dorsal mRNA. The Dorsal morphogen gradient patterns the dorsal-ventral axis of the early Drosophila embryo, and we found that an empirical description of the Dorsal gradient is highly sensitive to maternal dorsal dosage. In contrast, we found experimentally that gene expression patterns are highly robust. Although the components of this signaling module have been characterized in detail, how their function is integrated to produce robust gene expression patterns to variations in the dorsal maternal dosage is still unclear. Therefore, we analyzed a mechanistic model of the Dorsal signaling module and found that Cactus, a cytoplasmic inhibitor for Dorsal, must be present in the nucleus for the system to be robust. Furthermore, active Toll, the receptor that dissociates Cactus from Dorsal, must be saturated. Finally, the vast majority of robust descriptions of the system require facilitated diffusion of Dorsal by Cactus. Each of these three recently-discovered mechanisms of the Dorsal module are critical for robustness. These mechanisms synergistically contribute to changing the amplitude and shape of the active Dorsal gradient, which is required for robust gene expression. Our work highlights the need for quantitative understanding of biophysical mechanisms of morphogen gradients in order to understand emergent phenotypes, such as robustness.
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spelling pubmed-71625452020-04-24 Robustness of the Dorsal morphogen gradient with respect to morphogen dosage Al Asafen, Hadel Bandodkar, Prasad U. Carrell-Noel, Sophia Schloop, Allison E. Friedman, Jeramey Reeves, Gregory T. PLoS Comput Biol Research Article In multicellular organisms, the timing and placement of gene expression in a developing tissue assigns the fate of each cell in the embryo in order for a uniform field of cells to differentiate into a reproducible pattern of organs and tissues. This positional information is often achieved through the action of spatial gradients of morphogens. Spatial patterns of gene expression are paradoxically robust to variations in morphogen dosage, given that, by definition, gene expression must be sensitive to morphogen concentration. In this work we investigate the robustness of the Dorsal/NF-κB signaling module with respect to perturbations to the dosage of maternally-expressed dorsal mRNA. The Dorsal morphogen gradient patterns the dorsal-ventral axis of the early Drosophila embryo, and we found that an empirical description of the Dorsal gradient is highly sensitive to maternal dorsal dosage. In contrast, we found experimentally that gene expression patterns are highly robust. Although the components of this signaling module have been characterized in detail, how their function is integrated to produce robust gene expression patterns to variations in the dorsal maternal dosage is still unclear. Therefore, we analyzed a mechanistic model of the Dorsal signaling module and found that Cactus, a cytoplasmic inhibitor for Dorsal, must be present in the nucleus for the system to be robust. Furthermore, active Toll, the receptor that dissociates Cactus from Dorsal, must be saturated. Finally, the vast majority of robust descriptions of the system require facilitated diffusion of Dorsal by Cactus. Each of these three recently-discovered mechanisms of the Dorsal module are critical for robustness. These mechanisms synergistically contribute to changing the amplitude and shape of the active Dorsal gradient, which is required for robust gene expression. Our work highlights the need for quantitative understanding of biophysical mechanisms of morphogen gradients in order to understand emergent phenotypes, such as robustness. Public Library of Science 2020-04-06 /pmc/articles/PMC7162545/ /pubmed/32251432 http://dx.doi.org/10.1371/journal.pcbi.1007750 Text en © 2020 Al Asafen et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Al Asafen, Hadel
Bandodkar, Prasad U.
Carrell-Noel, Sophia
Schloop, Allison E.
Friedman, Jeramey
Reeves, Gregory T.
Robustness of the Dorsal morphogen gradient with respect to morphogen dosage
title Robustness of the Dorsal morphogen gradient with respect to morphogen dosage
title_full Robustness of the Dorsal morphogen gradient with respect to morphogen dosage
title_fullStr Robustness of the Dorsal morphogen gradient with respect to morphogen dosage
title_full_unstemmed Robustness of the Dorsal morphogen gradient with respect to morphogen dosage
title_short Robustness of the Dorsal morphogen gradient with respect to morphogen dosage
title_sort robustness of the dorsal morphogen gradient with respect to morphogen dosage
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7162545/
https://www.ncbi.nlm.nih.gov/pubmed/32251432
http://dx.doi.org/10.1371/journal.pcbi.1007750
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