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Catalyzing rapid discovery of gold-precipitating bacterial lineages with university students

Intriguing and potentially commercially useful microorganisms are found in our surroundings and new tools allow us to learn about their genetic potential and evolutionary history. Engaging students from different disciplines and courses in the search for microbes requires an exciting project with in...

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Autores principales: Riley, Noah G., Goller, Carlos C., Leggett, Zakiya H., Lewis, Danica M., Ciccone, Karen, Dunn, Robert R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7164421/
https://www.ncbi.nlm.nih.gov/pubmed/32322441
http://dx.doi.org/10.7717/peerj.8925
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author Riley, Noah G.
Goller, Carlos C.
Leggett, Zakiya H.
Lewis, Danica M.
Ciccone, Karen
Dunn, Robert R.
author_facet Riley, Noah G.
Goller, Carlos C.
Leggett, Zakiya H.
Lewis, Danica M.
Ciccone, Karen
Dunn, Robert R.
author_sort Riley, Noah G.
collection PubMed
description Intriguing and potentially commercially useful microorganisms are found in our surroundings and new tools allow us to learn about their genetic potential and evolutionary history. Engaging students from different disciplines and courses in the search for microbes requires an exciting project with innovative but straightforward procedures and goals. Here we describe an interdisciplinary program to engage students from different courses in the sampling, identification and analysis of the DNA sequences of a unique yet common microbe, Delftia spp. A campus-wide challenge was created to identify the prevalence of this genus, able to precipitate gold, involving introductory level environmental and life science courses, upper-level advanced laboratory modules taken by undergraduate students (juniors and seniors), graduate students and staff from the campus. The number of participants involved allowed for extensive sampling while undergraduate researchers and students in lab-based courses participated in the sample processing and analyses, helping contextualize and solidify their learning of the molecular biology techniques. The results were shared at each step through publicly accessible websites and workshops. This model allows for the rapid discovery of Delftia presence and prevalence and is adaptable to different campuses and experimental questions.
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spelling pubmed-71644212020-04-22 Catalyzing rapid discovery of gold-precipitating bacterial lineages with university students Riley, Noah G. Goller, Carlos C. Leggett, Zakiya H. Lewis, Danica M. Ciccone, Karen Dunn, Robert R. PeerJ Biodiversity Intriguing and potentially commercially useful microorganisms are found in our surroundings and new tools allow us to learn about their genetic potential and evolutionary history. Engaging students from different disciplines and courses in the search for microbes requires an exciting project with innovative but straightforward procedures and goals. Here we describe an interdisciplinary program to engage students from different courses in the sampling, identification and analysis of the DNA sequences of a unique yet common microbe, Delftia spp. A campus-wide challenge was created to identify the prevalence of this genus, able to precipitate gold, involving introductory level environmental and life science courses, upper-level advanced laboratory modules taken by undergraduate students (juniors and seniors), graduate students and staff from the campus. The number of participants involved allowed for extensive sampling while undergraduate researchers and students in lab-based courses participated in the sample processing and analyses, helping contextualize and solidify their learning of the molecular biology techniques. The results were shared at each step through publicly accessible websites and workshops. This model allows for the rapid discovery of Delftia presence and prevalence and is adaptable to different campuses and experimental questions. PeerJ Inc. 2020-04-14 /pmc/articles/PMC7164421/ /pubmed/32322441 http://dx.doi.org/10.7717/peerj.8925 Text en © 2020 Riley et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Biodiversity
Riley, Noah G.
Goller, Carlos C.
Leggett, Zakiya H.
Lewis, Danica M.
Ciccone, Karen
Dunn, Robert R.
Catalyzing rapid discovery of gold-precipitating bacterial lineages with university students
title Catalyzing rapid discovery of gold-precipitating bacterial lineages with university students
title_full Catalyzing rapid discovery of gold-precipitating bacterial lineages with university students
title_fullStr Catalyzing rapid discovery of gold-precipitating bacterial lineages with university students
title_full_unstemmed Catalyzing rapid discovery of gold-precipitating bacterial lineages with university students
title_short Catalyzing rapid discovery of gold-precipitating bacterial lineages with university students
title_sort catalyzing rapid discovery of gold-precipitating bacterial lineages with university students
topic Biodiversity
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7164421/
https://www.ncbi.nlm.nih.gov/pubmed/32322441
http://dx.doi.org/10.7717/peerj.8925
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