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NeuroQuery, comprehensive meta-analysis of human brain mapping
Reaching a global view of brain organization requires assembling evidence on widely different mental processes and mechanisms. The variety of human neuroscience concepts and terminology poses a fundamental challenge to relating brain imaging results across the scientific literature. Existing meta-an...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7164961/ https://www.ncbi.nlm.nih.gov/pubmed/32129761 http://dx.doi.org/10.7554/eLife.53385 |
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author | Dockès, Jérôme Poldrack, Russell A Primet, Romain Gözükan, Hande Yarkoni, Tal Suchanek, Fabian Thirion, Bertrand Varoquaux, Gaël |
author_facet | Dockès, Jérôme Poldrack, Russell A Primet, Romain Gözükan, Hande Yarkoni, Tal Suchanek, Fabian Thirion, Bertrand Varoquaux, Gaël |
author_sort | Dockès, Jérôme |
collection | PubMed |
description | Reaching a global view of brain organization requires assembling evidence on widely different mental processes and mechanisms. The variety of human neuroscience concepts and terminology poses a fundamental challenge to relating brain imaging results across the scientific literature. Existing meta-analysis methods perform statistical tests on sets of publications associated with a particular concept. Thus, large-scale meta-analyses only tackle single terms that occur frequently. We propose a new paradigm, focusing on prediction rather than inference. Our multivariate model predicts the spatial distribution of neurological observations, given text describing an experiment, cognitive process, or disease. This approach handles text of arbitrary length and terms that are too rare for standard meta-analysis. We capture the relationships and neural correlates of 7547 neuroscience terms across 13 459 neuroimaging publications. The resulting meta-analytic tool, neuroquery.org, can ground hypothesis generation and data-analysis priors on a comprehensive view of published findings on the brain. |
format | Online Article Text |
id | pubmed-7164961 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-71649612020-04-20 NeuroQuery, comprehensive meta-analysis of human brain mapping Dockès, Jérôme Poldrack, Russell A Primet, Romain Gözükan, Hande Yarkoni, Tal Suchanek, Fabian Thirion, Bertrand Varoquaux, Gaël eLife Neuroscience Reaching a global view of brain organization requires assembling evidence on widely different mental processes and mechanisms. The variety of human neuroscience concepts and terminology poses a fundamental challenge to relating brain imaging results across the scientific literature. Existing meta-analysis methods perform statistical tests on sets of publications associated with a particular concept. Thus, large-scale meta-analyses only tackle single terms that occur frequently. We propose a new paradigm, focusing on prediction rather than inference. Our multivariate model predicts the spatial distribution of neurological observations, given text describing an experiment, cognitive process, or disease. This approach handles text of arbitrary length and terms that are too rare for standard meta-analysis. We capture the relationships and neural correlates of 7547 neuroscience terms across 13 459 neuroimaging publications. The resulting meta-analytic tool, neuroquery.org, can ground hypothesis generation and data-analysis priors on a comprehensive view of published findings on the brain. eLife Sciences Publications, Ltd 2020-03-04 /pmc/articles/PMC7164961/ /pubmed/32129761 http://dx.doi.org/10.7554/eLife.53385 Text en © 2020, Dockès et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Neuroscience Dockès, Jérôme Poldrack, Russell A Primet, Romain Gözükan, Hande Yarkoni, Tal Suchanek, Fabian Thirion, Bertrand Varoquaux, Gaël NeuroQuery, comprehensive meta-analysis of human brain mapping |
title | NeuroQuery, comprehensive meta-analysis of human brain mapping |
title_full | NeuroQuery, comprehensive meta-analysis of human brain mapping |
title_fullStr | NeuroQuery, comprehensive meta-analysis of human brain mapping |
title_full_unstemmed | NeuroQuery, comprehensive meta-analysis of human brain mapping |
title_short | NeuroQuery, comprehensive meta-analysis of human brain mapping |
title_sort | neuroquery, comprehensive meta-analysis of human brain mapping |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7164961/ https://www.ncbi.nlm.nih.gov/pubmed/32129761 http://dx.doi.org/10.7554/eLife.53385 |
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