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CT radiomics can help screen the Coronavirus disease 2019 (COVID-19): a preliminary study
The Coronavirus disease 2019 (COVID-19) is raging across the world. The radiomics, which explores huge amounts of features from medical image for disease diagnosis, may help the screen of the COVID-19. In this study, we aim to develop a radiomic signature to screen COVID-19 from CT images. We retros...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Science China Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7166002/ http://dx.doi.org/10.1007/s11432-020-2849-3 |
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author | Fang, Mengjie He, Bingxi Li, Li Dong, Di Yang, Xin Li, Cong Meng, Lingwei Zhong, Lianzhen Li, Hailin Li, Hongjun Tian, Jie |
author_facet | Fang, Mengjie He, Bingxi Li, Li Dong, Di Yang, Xin Li, Cong Meng, Lingwei Zhong, Lianzhen Li, Hailin Li, Hongjun Tian, Jie |
author_sort | Fang, Mengjie |
collection | PubMed |
description | The Coronavirus disease 2019 (COVID-19) is raging across the world. The radiomics, which explores huge amounts of features from medical image for disease diagnosis, may help the screen of the COVID-19. In this study, we aim to develop a radiomic signature to screen COVID-19 from CT images. We retrospectively collect 75 pneumonia patients from Beijing Youan Hospital, including 46 patients with COVID-19 and 29 other types of pneumonias. These patients are divided into training set (n = 50) and test set (n = 25) at random. We segment the lung lesions from the CT images, and extract 77 radiomic features from the lesions. Then unsupervised consensus clustering and multiple cross-validation are utilized to select the key features that are associated with the COVID-19. In the experiments, while twenty-three radiomic features are found to be highly associated with COVID-19, four key features are screened and used as the inputs of support vector machine to build the radiomic signature. We use area under the receiver operating characteristic curve (AUC) and calibration curve to assess the performance of our model. It yields AUCs of 0.862 and 0.826 in the training set and the test set respectively. We also perform the stratified analysis and find that its predictive ability is not affected by gender, age, chronic disease and degree of severity. In conclusion, we investigate the value of radiomics in screening COVID-19, and the experimental results suggest the radiomic signature could be a potential tool for diagnosis of COVID-19. |
format | Online Article Text |
id | pubmed-7166002 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Science China Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-71660022020-04-20 CT radiomics can help screen the Coronavirus disease 2019 (COVID-19): a preliminary study Fang, Mengjie He, Bingxi Li, Li Dong, Di Yang, Xin Li, Cong Meng, Lingwei Zhong, Lianzhen Li, Hailin Li, Hongjun Tian, Jie Sci. China Inf. Sci. Research Paper The Coronavirus disease 2019 (COVID-19) is raging across the world. The radiomics, which explores huge amounts of features from medical image for disease diagnosis, may help the screen of the COVID-19. In this study, we aim to develop a radiomic signature to screen COVID-19 from CT images. We retrospectively collect 75 pneumonia patients from Beijing Youan Hospital, including 46 patients with COVID-19 and 29 other types of pneumonias. These patients are divided into training set (n = 50) and test set (n = 25) at random. We segment the lung lesions from the CT images, and extract 77 radiomic features from the lesions. Then unsupervised consensus clustering and multiple cross-validation are utilized to select the key features that are associated with the COVID-19. In the experiments, while twenty-three radiomic features are found to be highly associated with COVID-19, four key features are screened and used as the inputs of support vector machine to build the radiomic signature. We use area under the receiver operating characteristic curve (AUC) and calibration curve to assess the performance of our model. It yields AUCs of 0.862 and 0.826 in the training set and the test set respectively. We also perform the stratified analysis and find that its predictive ability is not affected by gender, age, chronic disease and degree of severity. In conclusion, we investigate the value of radiomics in screening COVID-19, and the experimental results suggest the radiomic signature could be a potential tool for diagnosis of COVID-19. Science China Press 2020-04-15 2020 /pmc/articles/PMC7166002/ http://dx.doi.org/10.1007/s11432-020-2849-3 Text en © Science China Press and Springer-Verlag GmbH Germany, part of Springer Nature 2020 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Research Paper Fang, Mengjie He, Bingxi Li, Li Dong, Di Yang, Xin Li, Cong Meng, Lingwei Zhong, Lianzhen Li, Hailin Li, Hongjun Tian, Jie CT radiomics can help screen the Coronavirus disease 2019 (COVID-19): a preliminary study |
title | CT radiomics can help screen the Coronavirus disease 2019 (COVID-19): a preliminary study |
title_full | CT radiomics can help screen the Coronavirus disease 2019 (COVID-19): a preliminary study |
title_fullStr | CT radiomics can help screen the Coronavirus disease 2019 (COVID-19): a preliminary study |
title_full_unstemmed | CT radiomics can help screen the Coronavirus disease 2019 (COVID-19): a preliminary study |
title_short | CT radiomics can help screen the Coronavirus disease 2019 (COVID-19): a preliminary study |
title_sort | ct radiomics can help screen the coronavirus disease 2019 (covid-19): a preliminary study |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7166002/ http://dx.doi.org/10.1007/s11432-020-2849-3 |
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