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In vitro and bioinformatics mechanistic-based approach for cadmium carcinogenicity understanding

Cadmium is a toxic metal able to enter the cells through channels and transport pathways dedicated to essential ions, leading, among others, to the dysregulation of divalent ions homeostasis. Despite its recognized human carcinogenicity, the mechanisms are still under investigation. A powerful tool...

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Autores principales: Oldani, Monica, Fabbri, Marco, Melchioretto, Pasquale, Callegaro, Giulia, Fusi, Paola, Gribaldo, Laura, Forcella, Matilde, Urani, Chiara
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pergamon Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7166080/
https://www.ncbi.nlm.nih.gov/pubmed/31904401
http://dx.doi.org/10.1016/j.tiv.2020.104757
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author Oldani, Monica
Fabbri, Marco
Melchioretto, Pasquale
Callegaro, Giulia
Fusi, Paola
Gribaldo, Laura
Forcella, Matilde
Urani, Chiara
author_facet Oldani, Monica
Fabbri, Marco
Melchioretto, Pasquale
Callegaro, Giulia
Fusi, Paola
Gribaldo, Laura
Forcella, Matilde
Urani, Chiara
author_sort Oldani, Monica
collection PubMed
description Cadmium is a toxic metal able to enter the cells through channels and transport pathways dedicated to essential ions, leading, among others, to the dysregulation of divalent ions homeostasis. Despite its recognized human carcinogenicity, the mechanisms are still under investigation. A powerful tool for mechanistic studies of carcinogenesis is the Cell Transformation Assay (CTA). We have isolated and characterized by whole genome microarray and bioinformatics analysis of differentially expressed genes (DEGs) cadmium-transformed cells from different foci (F1, F2, and F3) at the end of CTA (6 weeks). The systematic analysis of up- and down-regulated transcripts and the comparison of DEGs in transformed cells evidence different functional targets and the complex picture of cadmium-induced transformation. Only 34 in common DEGs are found in cells from all foci, and among these, only 4 genes are jointly up-regulated (Ccl2, Ccl5, IL6 and Spp1), all responsible for cytokines/chemokines coding. Most in common DEGs are down-regulated, suggesting that the switching-off of specific functions plays a major role in this process. In addition, the comparison of dysregulated pathways immediately after cadmium treatment with those in transformed cells provides a valuable means to the comprehension of the overall process.
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spelling pubmed-71660802020-06-01 In vitro and bioinformatics mechanistic-based approach for cadmium carcinogenicity understanding Oldani, Monica Fabbri, Marco Melchioretto, Pasquale Callegaro, Giulia Fusi, Paola Gribaldo, Laura Forcella, Matilde Urani, Chiara Toxicol In Vitro Article Cadmium is a toxic metal able to enter the cells through channels and transport pathways dedicated to essential ions, leading, among others, to the dysregulation of divalent ions homeostasis. Despite its recognized human carcinogenicity, the mechanisms are still under investigation. A powerful tool for mechanistic studies of carcinogenesis is the Cell Transformation Assay (CTA). We have isolated and characterized by whole genome microarray and bioinformatics analysis of differentially expressed genes (DEGs) cadmium-transformed cells from different foci (F1, F2, and F3) at the end of CTA (6 weeks). The systematic analysis of up- and down-regulated transcripts and the comparison of DEGs in transformed cells evidence different functional targets and the complex picture of cadmium-induced transformation. Only 34 in common DEGs are found in cells from all foci, and among these, only 4 genes are jointly up-regulated (Ccl2, Ccl5, IL6 and Spp1), all responsible for cytokines/chemokines coding. Most in common DEGs are down-regulated, suggesting that the switching-off of specific functions plays a major role in this process. In addition, the comparison of dysregulated pathways immediately after cadmium treatment with those in transformed cells provides a valuable means to the comprehension of the overall process. Pergamon Press 2020-06 /pmc/articles/PMC7166080/ /pubmed/31904401 http://dx.doi.org/10.1016/j.tiv.2020.104757 Text en © 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Oldani, Monica
Fabbri, Marco
Melchioretto, Pasquale
Callegaro, Giulia
Fusi, Paola
Gribaldo, Laura
Forcella, Matilde
Urani, Chiara
In vitro and bioinformatics mechanistic-based approach for cadmium carcinogenicity understanding
title In vitro and bioinformatics mechanistic-based approach for cadmium carcinogenicity understanding
title_full In vitro and bioinformatics mechanistic-based approach for cadmium carcinogenicity understanding
title_fullStr In vitro and bioinformatics mechanistic-based approach for cadmium carcinogenicity understanding
title_full_unstemmed In vitro and bioinformatics mechanistic-based approach for cadmium carcinogenicity understanding
title_short In vitro and bioinformatics mechanistic-based approach for cadmium carcinogenicity understanding
title_sort in vitro and bioinformatics mechanistic-based approach for cadmium carcinogenicity understanding
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7166080/
https://www.ncbi.nlm.nih.gov/pubmed/31904401
http://dx.doi.org/10.1016/j.tiv.2020.104757
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