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Research on Hybrid Feature Selection Method Based on Iterative Approximation Markov Blanket
The basic experimental data of traditional Chinese medicine are generally obtained by high-performance liquid chromatography and mass spectrometry. The data often show the characteristics of high dimensionality and few samples, and there are many irrelevant features and redundant features in the dat...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7166270/ https://www.ncbi.nlm.nih.gov/pubmed/32328156 http://dx.doi.org/10.1155/2020/8308173 |
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author | Huang, Canyi Li, Keding Du, Jianqiang Nie, Bin Xu, Guoliang Xiong, Wangping Luo, Jigen |
author_facet | Huang, Canyi Li, Keding Du, Jianqiang Nie, Bin Xu, Guoliang Xiong, Wangping Luo, Jigen |
author_sort | Huang, Canyi |
collection | PubMed |
description | The basic experimental data of traditional Chinese medicine are generally obtained by high-performance liquid chromatography and mass spectrometry. The data often show the characteristics of high dimensionality and few samples, and there are many irrelevant features and redundant features in the data, which bring challenges to the in-depth exploration of Chinese medicine material information. A hybrid feature selection method based on iterative approximate Markov blanket (CI_AMB) is proposed in the paper. The method uses the maximum information coefficient to measure the correlation between features and target variables and achieves the purpose of filtering irrelevant features according to the evaluation criteria, firstly. The iterative approximation Markov blanket strategy analyzes the redundancy between features and implements the elimination of redundant features and then selects an effective feature subset finally. Comparative experiments using traditional Chinese medicine material basic experimental data and UCI's multiple public datasets show that the new method has a better advantage to select a small number of highly explanatory features, compared with Lasso, XGBoost, and the classic approximate Markov blanket method. |
format | Online Article Text |
id | pubmed-7166270 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-71662702020-04-23 Research on Hybrid Feature Selection Method Based on Iterative Approximation Markov Blanket Huang, Canyi Li, Keding Du, Jianqiang Nie, Bin Xu, Guoliang Xiong, Wangping Luo, Jigen Comput Math Methods Med Research Article The basic experimental data of traditional Chinese medicine are generally obtained by high-performance liquid chromatography and mass spectrometry. The data often show the characteristics of high dimensionality and few samples, and there are many irrelevant features and redundant features in the data, which bring challenges to the in-depth exploration of Chinese medicine material information. A hybrid feature selection method based on iterative approximate Markov blanket (CI_AMB) is proposed in the paper. The method uses the maximum information coefficient to measure the correlation between features and target variables and achieves the purpose of filtering irrelevant features according to the evaluation criteria, firstly. The iterative approximation Markov blanket strategy analyzes the redundancy between features and implements the elimination of redundant features and then selects an effective feature subset finally. Comparative experiments using traditional Chinese medicine material basic experimental data and UCI's multiple public datasets show that the new method has a better advantage to select a small number of highly explanatory features, compared with Lasso, XGBoost, and the classic approximate Markov blanket method. Hindawi 2020-04-07 /pmc/articles/PMC7166270/ /pubmed/32328156 http://dx.doi.org/10.1155/2020/8308173 Text en Copyright © 2020 Canyi Huang et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Huang, Canyi Li, Keding Du, Jianqiang Nie, Bin Xu, Guoliang Xiong, Wangping Luo, Jigen Research on Hybrid Feature Selection Method Based on Iterative Approximation Markov Blanket |
title | Research on Hybrid Feature Selection Method Based on Iterative Approximation Markov Blanket |
title_full | Research on Hybrid Feature Selection Method Based on Iterative Approximation Markov Blanket |
title_fullStr | Research on Hybrid Feature Selection Method Based on Iterative Approximation Markov Blanket |
title_full_unstemmed | Research on Hybrid Feature Selection Method Based on Iterative Approximation Markov Blanket |
title_short | Research on Hybrid Feature Selection Method Based on Iterative Approximation Markov Blanket |
title_sort | research on hybrid feature selection method based on iterative approximation markov blanket |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7166270/ https://www.ncbi.nlm.nih.gov/pubmed/32328156 http://dx.doi.org/10.1155/2020/8308173 |
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