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Association Analysis Between SNPs in the Promoter Region of RGS4 and Schizophrenia in the Northern Chinese Han Population
BACKGROUND: Abnormal RGS4 gene expression may cause neurotransmitter disorders, resulting in schizophrenia. The association between RGS4 and the risk of schizophrenia is controversial, and there has been little research on the SNPs in the promoter region of RGS4. PURPOSE: The present study was perfo...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Dove
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7169994/ https://www.ncbi.nlm.nih.gov/pubmed/32346293 http://dx.doi.org/10.2147/NDT.S250282 |
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author | Xu, Feng-ling Yao, Jun Wu, Xue Xia, Xi Xing, Jia-xin Xuan, Jin-feng Liu, Yong-ping Wang, Bao-jie |
author_facet | Xu, Feng-ling Yao, Jun Wu, Xue Xia, Xi Xing, Jia-xin Xuan, Jin-feng Liu, Yong-ping Wang, Bao-jie |
author_sort | Xu, Feng-ling |
collection | PubMed |
description | BACKGROUND: Abnormal RGS4 gene expression may cause neurotransmitter disorders, resulting in schizophrenia. The association between RGS4 and the risk of schizophrenia is controversial, and there has been little research on the SNPs in the promoter region of RGS4. PURPOSE: The present study was performed to detect the association between SNPs in the promoter region of the RGS4 gene and the risk of schizophrenia. MATERIALS AND METHODS: In this study, the 1757-bp fragment (−1119–+600, TSS+1) of RGS4 was amplified and sequenced in 198 schizophrenia patients and 264 healthy controls of the northern Chinese Han population. Allele, genotype and haplotype frequencies were analyzed by chi‐square test. RESULTS: Four SNPs were detected in the region. LD analysis determined that rs7515900 was linked to rs10917671 (D’ = 1, r(2) = 1). Therefore, the data for rs10917671 were eliminated from further analysis. Genotype TT of rs12041948 (P = 0.009, OR = 1.829, and 95% CI = 0.038–0.766) was significantly different between the two groups in the northern Chinese Han population. In males, genotype GG of rs6678136 (P = 0.009, OR = 2.292, and 95% CI = 1.256–4.18) and CC of rs7515900 (P = 0.003, OR = 2.523, and 95% CI = 1.332–4.778) were significantly different. CONCLUSION: The results of this study suggested that genotype TT of rs12041948 in the pooled male and female samples and GG of rs6678136 and CC of rs7515900 in the male samples could be risk factors for schizophrenia. The present study is the first to detect an association between SNPs in the promoter region of the RGS4 gene and the risk of schizophrenia in the northern Chinese Han population. Functional studies are required to confirm these findings. |
format | Online Article Text |
id | pubmed-7169994 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Dove |
record_format | MEDLINE/PubMed |
spelling | pubmed-71699942020-04-28 Association Analysis Between SNPs in the Promoter Region of RGS4 and Schizophrenia in the Northern Chinese Han Population Xu, Feng-ling Yao, Jun Wu, Xue Xia, Xi Xing, Jia-xin Xuan, Jin-feng Liu, Yong-ping Wang, Bao-jie Neuropsychiatr Dis Treat Original Research BACKGROUND: Abnormal RGS4 gene expression may cause neurotransmitter disorders, resulting in schizophrenia. The association between RGS4 and the risk of schizophrenia is controversial, and there has been little research on the SNPs in the promoter region of RGS4. PURPOSE: The present study was performed to detect the association between SNPs in the promoter region of the RGS4 gene and the risk of schizophrenia. MATERIALS AND METHODS: In this study, the 1757-bp fragment (−1119–+600, TSS+1) of RGS4 was amplified and sequenced in 198 schizophrenia patients and 264 healthy controls of the northern Chinese Han population. Allele, genotype and haplotype frequencies were analyzed by chi‐square test. RESULTS: Four SNPs were detected in the region. LD analysis determined that rs7515900 was linked to rs10917671 (D’ = 1, r(2) = 1). Therefore, the data for rs10917671 were eliminated from further analysis. Genotype TT of rs12041948 (P = 0.009, OR = 1.829, and 95% CI = 0.038–0.766) was significantly different between the two groups in the northern Chinese Han population. In males, genotype GG of rs6678136 (P = 0.009, OR = 2.292, and 95% CI = 1.256–4.18) and CC of rs7515900 (P = 0.003, OR = 2.523, and 95% CI = 1.332–4.778) were significantly different. CONCLUSION: The results of this study suggested that genotype TT of rs12041948 in the pooled male and female samples and GG of rs6678136 and CC of rs7515900 in the male samples could be risk factors for schizophrenia. The present study is the first to detect an association between SNPs in the promoter region of the RGS4 gene and the risk of schizophrenia in the northern Chinese Han population. Functional studies are required to confirm these findings. Dove 2020-04-16 /pmc/articles/PMC7169994/ /pubmed/32346293 http://dx.doi.org/10.2147/NDT.S250282 Text en © 2020 Xu et al. http://creativecommons.org/licenses/by-nc/3.0/ This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php). |
spellingShingle | Original Research Xu, Feng-ling Yao, Jun Wu, Xue Xia, Xi Xing, Jia-xin Xuan, Jin-feng Liu, Yong-ping Wang, Bao-jie Association Analysis Between SNPs in the Promoter Region of RGS4 and Schizophrenia in the Northern Chinese Han Population |
title | Association Analysis Between SNPs in the Promoter Region of RGS4 and Schizophrenia in the Northern Chinese Han Population |
title_full | Association Analysis Between SNPs in the Promoter Region of RGS4 and Schizophrenia in the Northern Chinese Han Population |
title_fullStr | Association Analysis Between SNPs in the Promoter Region of RGS4 and Schizophrenia in the Northern Chinese Han Population |
title_full_unstemmed | Association Analysis Between SNPs in the Promoter Region of RGS4 and Schizophrenia in the Northern Chinese Han Population |
title_short | Association Analysis Between SNPs in the Promoter Region of RGS4 and Schizophrenia in the Northern Chinese Han Population |
title_sort | association analysis between snps in the promoter region of rgs4 and schizophrenia in the northern chinese han population |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7169994/ https://www.ncbi.nlm.nih.gov/pubmed/32346293 http://dx.doi.org/10.2147/NDT.S250282 |
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