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Evaluation of an optimized method to directly identify bacteria from positive blood cultures using MALDI‐TOF mass spectrometry

BACKGROUND: Although various methods have been developed to directly identify bacteria from positive blood cultures by matrix‐assisted laser desorption ionization time‐of‐flight mass spectrometry (MALDI‐TOF MS), the necessity of using commercial kits still leads to a high cost and long assay time. M...

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Autores principales: Yuan, Youhua, Wang, Junjie, Zhang, Jiangfeng, Ma, Bing, Gao, Shanjun, Li, Yi, Wang, Shanmei, Wang, Baoya, Zhang, Qi, Jing, Nan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7171327/
https://www.ncbi.nlm.nih.gov/pubmed/31724218
http://dx.doi.org/10.1002/jcla.23119
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author Yuan, Youhua
Wang, Junjie
Zhang, Jiangfeng
Ma, Bing
Gao, Shanjun
Li, Yi
Wang, Shanmei
Wang, Baoya
Zhang, Qi
Jing, Nan
author_facet Yuan, Youhua
Wang, Junjie
Zhang, Jiangfeng
Ma, Bing
Gao, Shanjun
Li, Yi
Wang, Shanmei
Wang, Baoya
Zhang, Qi
Jing, Nan
author_sort Yuan, Youhua
collection PubMed
description BACKGROUND: Although various methods have been developed to directly identify bacteria from positive blood cultures by matrix‐assisted laser desorption ionization time‐of‐flight mass spectrometry (MALDI‐TOF MS), the necessity of using commercial kits still leads to a high cost and long assay time. Moreover, few evaluations of these methods have been conducted. This study aimed to evaluate the feasibility of an optimized MALDI‐TOF MS method for direct identification of bacteria in positive blood cultures. METHODS: A total of 829 non‐repeated positive cultures were collected from July 2018 to August 2019, and direct identification was performed by an optimized MALDI‐TOF MS method. The same positive blood cultures were sub‐cultivated to obtain a single bacterial colony and identified by classical biochemical BD testing, which is the gold standard to compare the accuracy of direct identification of positive blood cultures by MALDI‐TOF MS. RESULTS: After excluding 7 false‐positive samples from the 829 positive blood cultures, the most accurate rate of direct identification by this optimized MALDI‐TOF MS method was for gram‐negative bacteria (91.5%), followed by gram‐positive bacteria (88.3%), fungi (84.8%), anaerobic bacteria (80%), and other rare bacteria (66.67%). CONCLUSION: Common bacteria in positive blood cultures can be identified directly within 1 hour by MALDI‐TOF MS, and thus, this optimized method can be used as a primary identification method by clinicians. Routine implementation of this method may significantly increase the optimal utilization rate of antibiotics and decrease mortality in bacteremia patients.
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spelling pubmed-71713272020-04-21 Evaluation of an optimized method to directly identify bacteria from positive blood cultures using MALDI‐TOF mass spectrometry Yuan, Youhua Wang, Junjie Zhang, Jiangfeng Ma, Bing Gao, Shanjun Li, Yi Wang, Shanmei Wang, Baoya Zhang, Qi Jing, Nan J Clin Lab Anal Research Articles BACKGROUND: Although various methods have been developed to directly identify bacteria from positive blood cultures by matrix‐assisted laser desorption ionization time‐of‐flight mass spectrometry (MALDI‐TOF MS), the necessity of using commercial kits still leads to a high cost and long assay time. Moreover, few evaluations of these methods have been conducted. This study aimed to evaluate the feasibility of an optimized MALDI‐TOF MS method for direct identification of bacteria in positive blood cultures. METHODS: A total of 829 non‐repeated positive cultures were collected from July 2018 to August 2019, and direct identification was performed by an optimized MALDI‐TOF MS method. The same positive blood cultures were sub‐cultivated to obtain a single bacterial colony and identified by classical biochemical BD testing, which is the gold standard to compare the accuracy of direct identification of positive blood cultures by MALDI‐TOF MS. RESULTS: After excluding 7 false‐positive samples from the 829 positive blood cultures, the most accurate rate of direct identification by this optimized MALDI‐TOF MS method was for gram‐negative bacteria (91.5%), followed by gram‐positive bacteria (88.3%), fungi (84.8%), anaerobic bacteria (80%), and other rare bacteria (66.67%). CONCLUSION: Common bacteria in positive blood cultures can be identified directly within 1 hour by MALDI‐TOF MS, and thus, this optimized method can be used as a primary identification method by clinicians. Routine implementation of this method may significantly increase the optimal utilization rate of antibiotics and decrease mortality in bacteremia patients. John Wiley and Sons Inc. 2019-11-13 /pmc/articles/PMC7171327/ /pubmed/31724218 http://dx.doi.org/10.1002/jcla.23119 Text en © 2019 The Authors. Journal of Clinical Laboratory Analysis Published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Research Articles
Yuan, Youhua
Wang, Junjie
Zhang, Jiangfeng
Ma, Bing
Gao, Shanjun
Li, Yi
Wang, Shanmei
Wang, Baoya
Zhang, Qi
Jing, Nan
Evaluation of an optimized method to directly identify bacteria from positive blood cultures using MALDI‐TOF mass spectrometry
title Evaluation of an optimized method to directly identify bacteria from positive blood cultures using MALDI‐TOF mass spectrometry
title_full Evaluation of an optimized method to directly identify bacteria from positive blood cultures using MALDI‐TOF mass spectrometry
title_fullStr Evaluation of an optimized method to directly identify bacteria from positive blood cultures using MALDI‐TOF mass spectrometry
title_full_unstemmed Evaluation of an optimized method to directly identify bacteria from positive blood cultures using MALDI‐TOF mass spectrometry
title_short Evaluation of an optimized method to directly identify bacteria from positive blood cultures using MALDI‐TOF mass spectrometry
title_sort evaluation of an optimized method to directly identify bacteria from positive blood cultures using maldi‐tof mass spectrometry
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7171327/
https://www.ncbi.nlm.nih.gov/pubmed/31724218
http://dx.doi.org/10.1002/jcla.23119
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