Cargando…

Phage P22 tailspike protein: crystal structure of the head-binding domain at 2.3 Å, fully refined structure of the endorhamnosidase at 1.56 Å resolution, and the molecular basis of O-antigen recognition and cleavage

The tailspike protein of Salmonella phage P22 is a viral adhesion protein with both receptor binding and destroying activities. It recognises the O-antigenic repeating units of cell surface lipopolysaccharide of serogroup A, B and D1 as receptor, but also inactivates its receptor by endoglycosidase...

Descripción completa

Detalles Bibliográficos
Autores principales: Steinbacher, Stefan, Miller, Stefan, Baxa, Ulrich, Budisa, Nediljko, Weintraub, Andrej, Seckler, Robert, Huber, Robert
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Academic Press. 1997
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7172399/
https://www.ncbi.nlm.nih.gov/pubmed/9135118
http://dx.doi.org/10.1006/jmbi.1997.0922
_version_ 1783524249674186752
author Steinbacher, Stefan
Miller, Stefan
Baxa, Ulrich
Budisa, Nediljko
Weintraub, Andrej
Seckler, Robert
Huber, Robert
author_facet Steinbacher, Stefan
Miller, Stefan
Baxa, Ulrich
Budisa, Nediljko
Weintraub, Andrej
Seckler, Robert
Huber, Robert
author_sort Steinbacher, Stefan
collection PubMed
description The tailspike protein of Salmonella phage P22 is a viral adhesion protein with both receptor binding and destroying activities. It recognises the O-antigenic repeating units of cell surface lipopolysaccharide of serogroup A, B and D1 as receptor, but also inactivates its receptor by endoglycosidase (endorhamnosidase) activity. In the final step of bacteriophage P22 assembly six homotrimeric tailspike molecules are non-covalently attached to the DNA injection apparatus, mediated by their N-terminal, head-binding domains. We report the crystal structure of the head-binding domain of P22 tailspike protein at 2.3 Å resolution, solved with a recombinant telluromethionine derivative and non-crystallographic symmetry averaging. The trimeric dome-like structure is formed by two perpendicular β-sheets of five and three strands, respectively in each subunit and caps a three-helix bundle observed in the structure of the C-terminal receptor binding and cleaving fragment, reported here after full refinement at 1.56 Å resolution. In the central part of the receptor binding fragment, three parallel β-helices of 13 complete turns are associated side-by-side, while the three polypeptide strands merge into a single domain towards their C termini, with close interdigitation at the junction to the β-helix part. Complex structures with receptor fragments from S. typhimurium, S. enteritidis and S. typhi253Ty determined at 1.8 Å resolution are described in detail. Insertions into the β-helix form the O-antigen binding groove, which also harbours the active site residues Asp392, Asp395 and Glu359. In the intact structure of the tailspike protein, head-binding and receptor-binding parts are probably linked by a flexible hinge whose function may be either to deal with shearing forces on the exposed, 150 Å long tailspikes or to allow them to bend during the infection process.
format Online
Article
Text
id pubmed-7172399
institution National Center for Biotechnology Information
language English
publishDate 1997
publisher Academic Press.
record_format MEDLINE/PubMed
spelling pubmed-71723992020-04-22 Phage P22 tailspike protein: crystal structure of the head-binding domain at 2.3 Å, fully refined structure of the endorhamnosidase at 1.56 Å resolution, and the molecular basis of O-antigen recognition and cleavage Steinbacher, Stefan Miller, Stefan Baxa, Ulrich Budisa, Nediljko Weintraub, Andrej Seckler, Robert Huber, Robert J Mol Biol Regular Article The tailspike protein of Salmonella phage P22 is a viral adhesion protein with both receptor binding and destroying activities. It recognises the O-antigenic repeating units of cell surface lipopolysaccharide of serogroup A, B and D1 as receptor, but also inactivates its receptor by endoglycosidase (endorhamnosidase) activity. In the final step of bacteriophage P22 assembly six homotrimeric tailspike molecules are non-covalently attached to the DNA injection apparatus, mediated by their N-terminal, head-binding domains. We report the crystal structure of the head-binding domain of P22 tailspike protein at 2.3 Å resolution, solved with a recombinant telluromethionine derivative and non-crystallographic symmetry averaging. The trimeric dome-like structure is formed by two perpendicular β-sheets of five and three strands, respectively in each subunit and caps a three-helix bundle observed in the structure of the C-terminal receptor binding and cleaving fragment, reported here after full refinement at 1.56 Å resolution. In the central part of the receptor binding fragment, three parallel β-helices of 13 complete turns are associated side-by-side, while the three polypeptide strands merge into a single domain towards their C termini, with close interdigitation at the junction to the β-helix part. Complex structures with receptor fragments from S. typhimurium, S. enteritidis and S. typhi253Ty determined at 1.8 Å resolution are described in detail. Insertions into the β-helix form the O-antigen binding groove, which also harbours the active site residues Asp392, Asp395 and Glu359. In the intact structure of the tailspike protein, head-binding and receptor-binding parts are probably linked by a flexible hinge whose function may be either to deal with shearing forces on the exposed, 150 Å long tailspikes or to allow them to bend during the infection process. Academic Press. 1997-04-11 2002-05-25 /pmc/articles/PMC7172399/ /pubmed/9135118 http://dx.doi.org/10.1006/jmbi.1997.0922 Text en Copyright © 1997 Academic Press. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Regular Article
Steinbacher, Stefan
Miller, Stefan
Baxa, Ulrich
Budisa, Nediljko
Weintraub, Andrej
Seckler, Robert
Huber, Robert
Phage P22 tailspike protein: crystal structure of the head-binding domain at 2.3 Å, fully refined structure of the endorhamnosidase at 1.56 Å resolution, and the molecular basis of O-antigen recognition and cleavage
title Phage P22 tailspike protein: crystal structure of the head-binding domain at 2.3 Å, fully refined structure of the endorhamnosidase at 1.56 Å resolution, and the molecular basis of O-antigen recognition and cleavage
title_full Phage P22 tailspike protein: crystal structure of the head-binding domain at 2.3 Å, fully refined structure of the endorhamnosidase at 1.56 Å resolution, and the molecular basis of O-antigen recognition and cleavage
title_fullStr Phage P22 tailspike protein: crystal structure of the head-binding domain at 2.3 Å, fully refined structure of the endorhamnosidase at 1.56 Å resolution, and the molecular basis of O-antigen recognition and cleavage
title_full_unstemmed Phage P22 tailspike protein: crystal structure of the head-binding domain at 2.3 Å, fully refined structure of the endorhamnosidase at 1.56 Å resolution, and the molecular basis of O-antigen recognition and cleavage
title_short Phage P22 tailspike protein: crystal structure of the head-binding domain at 2.3 Å, fully refined structure of the endorhamnosidase at 1.56 Å resolution, and the molecular basis of O-antigen recognition and cleavage
title_sort phage p22 tailspike protein: crystal structure of the head-binding domain at 2.3 å, fully refined structure of the endorhamnosidase at 1.56 å resolution, and the molecular basis of o-antigen recognition and cleavage
topic Regular Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7172399/
https://www.ncbi.nlm.nih.gov/pubmed/9135118
http://dx.doi.org/10.1006/jmbi.1997.0922
work_keys_str_mv AT steinbacherstefan phagep22tailspikeproteincrystalstructureoftheheadbindingdomainat23afullyrefinedstructureoftheendorhamnosidaseat156aresolutionandthemolecularbasisofoantigenrecognitionandcleavage
AT millerstefan phagep22tailspikeproteincrystalstructureoftheheadbindingdomainat23afullyrefinedstructureoftheendorhamnosidaseat156aresolutionandthemolecularbasisofoantigenrecognitionandcleavage
AT baxaulrich phagep22tailspikeproteincrystalstructureoftheheadbindingdomainat23afullyrefinedstructureoftheendorhamnosidaseat156aresolutionandthemolecularbasisofoantigenrecognitionandcleavage
AT budisanediljko phagep22tailspikeproteincrystalstructureoftheheadbindingdomainat23afullyrefinedstructureoftheendorhamnosidaseat156aresolutionandthemolecularbasisofoantigenrecognitionandcleavage
AT weintraubandrej phagep22tailspikeproteincrystalstructureoftheheadbindingdomainat23afullyrefinedstructureoftheendorhamnosidaseat156aresolutionandthemolecularbasisofoantigenrecognitionandcleavage
AT secklerrobert phagep22tailspikeproteincrystalstructureoftheheadbindingdomainat23afullyrefinedstructureoftheendorhamnosidaseat156aresolutionandthemolecularbasisofoantigenrecognitionandcleavage
AT huberrobert phagep22tailspikeproteincrystalstructureoftheheadbindingdomainat23afullyrefinedstructureoftheendorhamnosidaseat156aresolutionandthemolecularbasisofoantigenrecognitionandcleavage