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Screening and functional prediction of differentially expressed circRNAs in proliferative human aortic smooth muscle cells

Vascular smooth muscle cell (VSMC) proliferation is the pathological base of vascular remodelling diseases. Circular RNAs (circRNAs) are important regulators involved in various biological processes. However, the function of circRNAs in VSMC proliferation regulation remains largely unknown. This stu...

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Autores principales: Chen, Wei, Lin, Jiajie, Li, Bin, Cao, Shanhu, Li, Huanhuan, Zhao, Jianzhi, Liu, Kun, Li, Yiming, Li, Yang, Sun, Shaoguang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7176856/
https://www.ncbi.nlm.nih.gov/pubmed/32155686
http://dx.doi.org/10.1111/jcmm.15150
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author Chen, Wei
Lin, Jiajie
Li, Bin
Cao, Shanhu
Li, Huanhuan
Zhao, Jianzhi
Liu, Kun
Li, Yiming
Li, Yang
Sun, Shaoguang
author_facet Chen, Wei
Lin, Jiajie
Li, Bin
Cao, Shanhu
Li, Huanhuan
Zhao, Jianzhi
Liu, Kun
Li, Yiming
Li, Yang
Sun, Shaoguang
author_sort Chen, Wei
collection PubMed
description Vascular smooth muscle cell (VSMC) proliferation is the pathological base of vascular remodelling diseases. Circular RNAs (circRNAs) are important regulators involved in various biological processes. However, the function of circRNAs in VSMC proliferation regulation remains largely unknown. This study was conducted to identify the key differentially expressed circRNAs (DEcircRNAs) and predict their functions in human aortic smooth muscle cell (HASMC) proliferation. To achieve this, DEcircRNAs between proliferative and quiescent HASMCs were detected using a microarray, followed by quantitative real‐time RT‐PCR validation. A DEcircRNA‐miRNA‐DEmRNA network was constructed, and functional annotation was performed using Gene Ontology (GO) and KEGG pathway analysis. The function of hsa_circ_0002579 in HASMC proliferation was analysed by Western blot. The functional annotation of the DEcircRNA‐miRNA‐DEmRNA network indicated that the four DEcircRNAs might play roles in the TGF‐β receptor signalling pathway, Ras signalling pathway, AMPK signalling pathway and Wnt signalling pathway. Twenty‐seven DEcircRNAs with coding potential were screened. Hsa_circ_0002579 might be a pro‐proliferation factor of HASMC. Overall, our study identified the key DEcircRNAs between proliferative and quiescent HASMCs, which might provide new important clues for exploring the functions of circRNAs in vascular remodelling diseases.
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spelling pubmed-71768562020-04-24 Screening and functional prediction of differentially expressed circRNAs in proliferative human aortic smooth muscle cells Chen, Wei Lin, Jiajie Li, Bin Cao, Shanhu Li, Huanhuan Zhao, Jianzhi Liu, Kun Li, Yiming Li, Yang Sun, Shaoguang J Cell Mol Med Original Articles Vascular smooth muscle cell (VSMC) proliferation is the pathological base of vascular remodelling diseases. Circular RNAs (circRNAs) are important regulators involved in various biological processes. However, the function of circRNAs in VSMC proliferation regulation remains largely unknown. This study was conducted to identify the key differentially expressed circRNAs (DEcircRNAs) and predict their functions in human aortic smooth muscle cell (HASMC) proliferation. To achieve this, DEcircRNAs between proliferative and quiescent HASMCs were detected using a microarray, followed by quantitative real‐time RT‐PCR validation. A DEcircRNA‐miRNA‐DEmRNA network was constructed, and functional annotation was performed using Gene Ontology (GO) and KEGG pathway analysis. The function of hsa_circ_0002579 in HASMC proliferation was analysed by Western blot. The functional annotation of the DEcircRNA‐miRNA‐DEmRNA network indicated that the four DEcircRNAs might play roles in the TGF‐β receptor signalling pathway, Ras signalling pathway, AMPK signalling pathway and Wnt signalling pathway. Twenty‐seven DEcircRNAs with coding potential were screened. Hsa_circ_0002579 might be a pro‐proliferation factor of HASMC. Overall, our study identified the key DEcircRNAs between proliferative and quiescent HASMCs, which might provide new important clues for exploring the functions of circRNAs in vascular remodelling diseases. John Wiley and Sons Inc. 2020-03-10 2020-04 /pmc/articles/PMC7176856/ /pubmed/32155686 http://dx.doi.org/10.1111/jcmm.15150 Text en © 2020 The Authors. Journal of Cellular and Molecular Medicine published by Foundation for Cellular and Molecular Medicine and John Wiley & Sons Ltd This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Chen, Wei
Lin, Jiajie
Li, Bin
Cao, Shanhu
Li, Huanhuan
Zhao, Jianzhi
Liu, Kun
Li, Yiming
Li, Yang
Sun, Shaoguang
Screening and functional prediction of differentially expressed circRNAs in proliferative human aortic smooth muscle cells
title Screening and functional prediction of differentially expressed circRNAs in proliferative human aortic smooth muscle cells
title_full Screening and functional prediction of differentially expressed circRNAs in proliferative human aortic smooth muscle cells
title_fullStr Screening and functional prediction of differentially expressed circRNAs in proliferative human aortic smooth muscle cells
title_full_unstemmed Screening and functional prediction of differentially expressed circRNAs in proliferative human aortic smooth muscle cells
title_short Screening and functional prediction of differentially expressed circRNAs in proliferative human aortic smooth muscle cells
title_sort screening and functional prediction of differentially expressed circrnas in proliferative human aortic smooth muscle cells
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7176856/
https://www.ncbi.nlm.nih.gov/pubmed/32155686
http://dx.doi.org/10.1111/jcmm.15150
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