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Detection of Rare Objects by Flow Cytometry: Imaging, Cell Sorting, and Deep Learning Approaches

Flow cytometry nowadays is among the main working instruments in modern biology paving the way for clinics to provide early, quick, and reliable diagnostics of many blood-related diseases. The major problem for clinical applications is the detection of rare pathogenic objects in patient blood. These...

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Autores principales: Voronin, Denis V., Kozlova, Anastasiia A., Verkhovskii, Roman A., Ermakov, Alexey V., Makarkin, Mikhail A., Inozemtseva, Olga A., Bratashov, Daniil N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7177904/
https://www.ncbi.nlm.nih.gov/pubmed/32230871
http://dx.doi.org/10.3390/ijms21072323
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author Voronin, Denis V.
Kozlova, Anastasiia A.
Verkhovskii, Roman A.
Ermakov, Alexey V.
Makarkin, Mikhail A.
Inozemtseva, Olga A.
Bratashov, Daniil N.
author_facet Voronin, Denis V.
Kozlova, Anastasiia A.
Verkhovskii, Roman A.
Ermakov, Alexey V.
Makarkin, Mikhail A.
Inozemtseva, Olga A.
Bratashov, Daniil N.
author_sort Voronin, Denis V.
collection PubMed
description Flow cytometry nowadays is among the main working instruments in modern biology paving the way for clinics to provide early, quick, and reliable diagnostics of many blood-related diseases. The major problem for clinical applications is the detection of rare pathogenic objects in patient blood. These objects can be circulating tumor cells, very rare during the early stages of cancer development, various microorganisms and parasites in the blood during acute blood infections. All of these rare diagnostic objects can be detected and identified very rapidly to save a patient’s life. This review outlines the main techniques of visualization of rare objects in the blood flow, methods for extraction of such objects from the blood flow for further investigations and new approaches to identify the objects automatically with the modern deep learning methods.
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spelling pubmed-71779042020-04-28 Detection of Rare Objects by Flow Cytometry: Imaging, Cell Sorting, and Deep Learning Approaches Voronin, Denis V. Kozlova, Anastasiia A. Verkhovskii, Roman A. Ermakov, Alexey V. Makarkin, Mikhail A. Inozemtseva, Olga A. Bratashov, Daniil N. Int J Mol Sci Review Flow cytometry nowadays is among the main working instruments in modern biology paving the way for clinics to provide early, quick, and reliable diagnostics of many blood-related diseases. The major problem for clinical applications is the detection of rare pathogenic objects in patient blood. These objects can be circulating tumor cells, very rare during the early stages of cancer development, various microorganisms and parasites in the blood during acute blood infections. All of these rare diagnostic objects can be detected and identified very rapidly to save a patient’s life. This review outlines the main techniques of visualization of rare objects in the blood flow, methods for extraction of such objects from the blood flow for further investigations and new approaches to identify the objects automatically with the modern deep learning methods. MDPI 2020-03-27 /pmc/articles/PMC7177904/ /pubmed/32230871 http://dx.doi.org/10.3390/ijms21072323 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Voronin, Denis V.
Kozlova, Anastasiia A.
Verkhovskii, Roman A.
Ermakov, Alexey V.
Makarkin, Mikhail A.
Inozemtseva, Olga A.
Bratashov, Daniil N.
Detection of Rare Objects by Flow Cytometry: Imaging, Cell Sorting, and Deep Learning Approaches
title Detection of Rare Objects by Flow Cytometry: Imaging, Cell Sorting, and Deep Learning Approaches
title_full Detection of Rare Objects by Flow Cytometry: Imaging, Cell Sorting, and Deep Learning Approaches
title_fullStr Detection of Rare Objects by Flow Cytometry: Imaging, Cell Sorting, and Deep Learning Approaches
title_full_unstemmed Detection of Rare Objects by Flow Cytometry: Imaging, Cell Sorting, and Deep Learning Approaches
title_short Detection of Rare Objects by Flow Cytometry: Imaging, Cell Sorting, and Deep Learning Approaches
title_sort detection of rare objects by flow cytometry: imaging, cell sorting, and deep learning approaches
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7177904/
https://www.ncbi.nlm.nih.gov/pubmed/32230871
http://dx.doi.org/10.3390/ijms21072323
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