Cargando…

Phylogeny and Functions of LOB Domain Proteins in Plants

Lateral organ boundaries (LOB) domain (LBD) genes, a gene family encoding plant-specific transcription factors, play important roles in plant growth and development. At present, though there have been a number of genome-wide analyses on LBD gene families and functional studies on individual LBD prot...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Yuwen, Li, Ziwen, Ma, Biao, Hou, Quancan, Wan, Xiangyuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7178066/
https://www.ncbi.nlm.nih.gov/pubmed/32224847
http://dx.doi.org/10.3390/ijms21072278
_version_ 1783525369716932608
author Zhang, Yuwen
Li, Ziwen
Ma, Biao
Hou, Quancan
Wan, Xiangyuan
author_facet Zhang, Yuwen
Li, Ziwen
Ma, Biao
Hou, Quancan
Wan, Xiangyuan
author_sort Zhang, Yuwen
collection PubMed
description Lateral organ boundaries (LOB) domain (LBD) genes, a gene family encoding plant-specific transcription factors, play important roles in plant growth and development. At present, though there have been a number of genome-wide analyses on LBD gene families and functional studies on individual LBD proteins, the diverse functions of LBD family members still confuse researchers and an effective strategy is required to summarize their functional diversity. To further integrate and improve our understanding of the phylogenetic classification, functional characteristics and regulatory mechanisms of LBD proteins, we review and discuss the functional characteristics of LBD proteins according to their classifications under a phylogenetic framework. It is proved that this strategy is effective in the anatomy of diverse functions of LBD family members. Additionally, by phylogenetic analysis, one monocot-specific and one eudicot-specific subclade of LBD proteins were found and their biological significance in monocot and eudicot development were also discussed separately. The review will help us better understand the functional diversity of LBD proteins and facilitate further studies on this plant-specific transcription factor family.
format Online
Article
Text
id pubmed-7178066
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-71780662020-04-28 Phylogeny and Functions of LOB Domain Proteins in Plants Zhang, Yuwen Li, Ziwen Ma, Biao Hou, Quancan Wan, Xiangyuan Int J Mol Sci Review Lateral organ boundaries (LOB) domain (LBD) genes, a gene family encoding plant-specific transcription factors, play important roles in plant growth and development. At present, though there have been a number of genome-wide analyses on LBD gene families and functional studies on individual LBD proteins, the diverse functions of LBD family members still confuse researchers and an effective strategy is required to summarize their functional diversity. To further integrate and improve our understanding of the phylogenetic classification, functional characteristics and regulatory mechanisms of LBD proteins, we review and discuss the functional characteristics of LBD proteins according to their classifications under a phylogenetic framework. It is proved that this strategy is effective in the anatomy of diverse functions of LBD family members. Additionally, by phylogenetic analysis, one monocot-specific and one eudicot-specific subclade of LBD proteins were found and their biological significance in monocot and eudicot development were also discussed separately. The review will help us better understand the functional diversity of LBD proteins and facilitate further studies on this plant-specific transcription factor family. MDPI 2020-03-26 /pmc/articles/PMC7178066/ /pubmed/32224847 http://dx.doi.org/10.3390/ijms21072278 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Zhang, Yuwen
Li, Ziwen
Ma, Biao
Hou, Quancan
Wan, Xiangyuan
Phylogeny and Functions of LOB Domain Proteins in Plants
title Phylogeny and Functions of LOB Domain Proteins in Plants
title_full Phylogeny and Functions of LOB Domain Proteins in Plants
title_fullStr Phylogeny and Functions of LOB Domain Proteins in Plants
title_full_unstemmed Phylogeny and Functions of LOB Domain Proteins in Plants
title_short Phylogeny and Functions of LOB Domain Proteins in Plants
title_sort phylogeny and functions of lob domain proteins in plants
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7178066/
https://www.ncbi.nlm.nih.gov/pubmed/32224847
http://dx.doi.org/10.3390/ijms21072278
work_keys_str_mv AT zhangyuwen phylogenyandfunctionsoflobdomainproteinsinplants
AT liziwen phylogenyandfunctionsoflobdomainproteinsinplants
AT mabiao phylogenyandfunctionsoflobdomainproteinsinplants
AT houquancan phylogenyandfunctionsoflobdomainproteinsinplants
AT wanxiangyuan phylogenyandfunctionsoflobdomainproteinsinplants